Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.345333
Rpl35
ribosomal protein L35
2
66489
Mm.345333
1700123D08Rik
RIKEN cDNA 1700123D08 gene
2
76646
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CGCCGCCGGC
(
2
)
311.6
0.3116
P8 Cb GC
GCTCTAGTCT (
4
)
3.3
0.0033
P8 Cb GC
CGCCGCCGGT
(
4
)
1.6
0.0016
Cb medulloblastoma
CGCCGCCGGC
(
2
)
141.1
0.1411
Cb medulloblastoma
GCTCTAGTCT (
4
)
4.6
0.0046
Cb medulloblastoma
TAACAACAAC (
7
)
4.6
0.0046
Cb medulloblastoma
CCCCGCCGGC (
2
)
2.3
0.0023
Cb medulloblastoma
CGCCGCCGGT
(
4
)
2.3
0.0023
P8 GC+1d culture
CGCCGCCGGC
(
2
)
179.2
0.1792
P8 GC+1d culture
GCTCTAGTCT (
4
)
5.7
0.0057
P8 GC+1d culture
CGCCGCCGGT
(
4
)
3.4
0.0034
P8 GC+1d culture
TAACAACAAC (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
CGCCGCCGGC
(
2
)
238.9
0.2389
P8 GC+SHH+1d culture
GCTCTAGTCT (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TAACAACAAC (
7
)
2.3
0.0023
3T3 fibroblasts
CGCCGCCGGC
(
2
)
476.7
0.4767
3T3 fibroblasts
CGCCGCCGGT
(
4
)
3.5
0.0035
3T3 fibroblasts
GCTCTAGTCT (
4
)
3.5
0.0035
E15 cortex
CGCCGCCGGC
(
2
)
346.3
0.3463
E15 cortex
CCCCGCCGGC (
2
)
4.9
0.0049
E15 cortex
CGCCGCCGGG (
3
)
4.9
0.0049
P1 cortex
CGCCGCCGGC
(
2
)
86.4
0.0864
Hypothalamus
CGCCGCCGGC
(
2
)
88.7
0.0887
Hypothalamus
GCTCTAGTCT (
4
)
1.8
0.0018
Hypothalamus
TAACAACAAC (
7
)
1.8
0.0018
E12.5 retina
CGCCGCCGGC
(
2
)
163.3
0.1633
E12.5 retina
GCTCTAGTCT (
4
)
1.9
0.0019
E14.5 retina
CGCCGCCGGC
(
2
)
164
0.164
E14.5 retina
GCTCTAGTCT (
4
)
14.6
0.0146
E14.5 retina
CGCCGCCGGT
(
4
)
3.6
0.0036
E16.5 retina
CGCCGCCGGC
(
2
)
260.8
0.2608
E16.5 retina
GCTCTAGTCT (
4
)
3.6
0.0036
E16.5 retina
CCCCGCCGGC (
2
)
1.8
0.0018
E16.5 retina
CGCCGCCGGT
(
4
)
1.8
0.0018
E18.5 retina
CGCCGCCGGC
(
2
)
200.1
0.2001
E18.5 retina
GCTCTAGTCT (
4
)
3.6
0.0036
E18.5 retina
CGCCGCCGGT
(
4
)
1.8
0.0018
P0.5 retina
CGCCGCCGGC
(
2
)
272.8
0.2728
P0.5 retina
CCCCGCCGGC (
2
)
5.9
0.0059
P0.5 retina
GCTCTAGTCT (
4
)
3.9
0.0039
P2.5 retina
CGCCGCCGGC
(
2
)
142.5
0.1425
P2.5 retina
CCCCGCCGGC (
2
)
7
0.007
P2.5 retina
CGCCGCCGGG (
3
)
1.8
0.0018
P2.5 retina
GCTCTAGTCT (
4
)
1.8
0.0018
P4.5 retina
CGCCGCCGGC
(
2
)
116.9
0.1169
P4.5 retina
GCTCTAGTCT (
4
)
4
0.004
P6.5 retina
CGCCGCCGGC
(
2
)
95
0.095
P6.5 retina
CGCCGCCGGT
(
4
)
1.7
0.0017
P10.5 crx- retina
CGCCGCCGGC
(
2
)
180.2
0.1802
P10.5 crx- retina
GCTCTAGTCT (
4
)
3.7
0.0037
P10.5 crx- retina
CGCCGCCGGG (
3
)
1.9
0.0019
P10.5 crx+ retina
CGCCGCCGGC
(
2
)
182.6
0.1826
P10.5 crx+ retina
CGCCGCCGGG (
3
)
3.8
0.0038
Adult retinal
CGCCGCCGGC
(
2
)
50
0.05
Adult retinal
CGCCGCCGGG (
3
)
3.7
0.0037
Adult retinal
CCCCGCCGGC (
2
)
1.9
0.0019
Adult retinal
CGCCGCCGGT
(
4
)
1.9
0.0019
Adult retinal
GCTCTAGTCT (
4
)
1.9
0.0019
ONL
CGCCGCCGGC
(
2
)
26.8
0.0268
ONL
CCCCGCCGGC (
2
)
1.9
0.0019
