Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.34580
Tbk1
TANK-binding kinase 1
10
56480
Mm.34580
AU014973
expressed sequence AU014973
10
103333
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 46 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGGCGCACG (
61
)
13.1
0.0131
P8 Cb GC
AAAAAATAAA
(
17
)
11.4
0.0114
P8 Cb GC
GCCAAGGCAG (
13
)
3.3
0.0033
Cb medulloblastoma
AAAAAATAAA
(
17
)
6.9
0.0069
Cb medulloblastoma
GTGGCGCACG (
61
)
6.9
0.0069
P8 GC+1d culture
AAAAAATAAA
(
17
)
8
0.008
P8 GC+1d culture
GTGGCGCACG (
61
)
6.8
0.0068
P8 GC+SHH+1d culture
GCCAAGGCAG (
13
)
5.9
0.0059
P8 GC+SHH+1d culture
AAAAAATAAA
(
17
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGGCGCACG (
61
)
2.3
0.0023
3T3 fibroblasts
GTGGCGCACG (
61
)
63.1
0.0631
E15 cortex
GTGGCGCACG (
61
)
113.8
0.1138
E15 cortex
GCCAAGGCAG (
13
)
4.9
0.0049
P1 cortex
GTGGCGCACG (
61
)
18.2
0.0182
Hypothalamus
AAAAAATAAA
(
17
)
9.1
0.0091
Hypothalamus
GTGGCGCACG (
61
)
3.6
0.0036
E12.5 retina
GTGGCGCACG (
61
)
11.3
0.0113
E12.5 retina
AAAAAATAAA
(
17
)
9.4
0.0094
E14.5 retina
GTGGCGCACG (
61
)
29.2
0.0292
E14.5 retina
AAAAAATAAA
(
17
)
5.5
0.0055
E16.5 retina
GTGGCGCACG (
61
)
25.4
0.0254
E16.5 retina
AAAAAATAAA
(
17
)
9.1
0.0091
E18.5 retina
AAAAAATAAA
(
17
)
16.4
0.0164
E18.5 retina
GTGGCGCACG (
61
)
10.9
0.0109
E18.5 retina
GCCAAGGCAG (
13
)
1.8
0.0018
P0.5 retina
GTGGCGCACG (
61
)
25.5
0.0255
P0.5 retina
AAAAAATAAA
(
17
)
2
0.002
P2.5 retina
GTGGCGCACG (
61
)
17.6
0.0176
P2.5 retina
AAAAAATAAA
(
17
)
12.3
0.0123
P2.5 retina
GCCAAGGCAG (
13
)
1.8
0.0018
P4.5 retina
GTGGCGCACG (
61
)
17.8
0.0178
P4.5 retina
AAAAAATAAA
(
17
)
11.9
0.0119
P6.5 retina
GTGGCGCACG (
61
)
38.3
0.0383
P6.5 retina
AAAAAATAAA
(
17
)
10
0.01
P6.5 retina
GCCAAGGCAG (
13
)
3.3
0.0033
P10.5 crx- retina
GTGGCGCACG (
61
)
13
0.013
P10.5 crx- retina
AAAAAATAAA
(
17
)
5.6
0.0056
P10.5 crx- retina
GCCAAGGCAG (
13
)
1.9
0.0019
P10.5 crx+ retina
GTGGCGCACG (
61
)
32.7
0.0327
P10.5 crx+ retina
GCCAAGGCAG (
13
)
3.8
0.0038
P10.5 crx+ retina
AAAAAATAAA
(
17
)
1.9
0.0019
Adult retinal
GTGGCGCACG (
61
)
22.2
0.0222
Adult retinal
GCCAAGGCAG (
13
)
5.6
0.0056
ONL
AAAAAATAAA
(
17
)
23
0.023
ONL
GTGGCGCACG (
61
)
23
0.023
ONL
GCCAAGGCAG (
13
)
1.9
0.0019
