Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.347	1810007M14Rik	RIKEN cDNA 1810007M14 gene	16		67367
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent
Human Homolog	C21orf66[chromosome 21 open reading frame 66]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACACACACA (106) 11.4 0.0114 P8 Cb GC TGGGATCCCT (4) 3.3 0.0033 P8 Cb GC CTTGGAAGGC (3) 1.6 0.0016 Cb medulloblastoma CACACACACA (106) 32.4 0.0324 Cb medulloblastoma CTTGGAAGGC (3) 4.6 0.0046 Cb medulloblastoma GCAGAGGCAG (2) 4.6 0.0046 Cb medulloblastoma TGGGATCCCT (4) 2.3 0.0023 P8 GC+1d culture CACACACACA (106) 6.8 0.0068 P8 GC+1d culture GCAGAGGCAG (2) 1.1 0.0011 P8 GC+SHH+1d culture CACACACACA (106) 9.4 0.0094 P8 GC+SHH+1d culture GCAGAGGCAG (2) 4.7 0.0047 P8 GC+SHH+1d culture AAAAACATCT (5) 2.3 0.0023 P8 GC+SHH+1d culture TGGGATCCCT (4) 1.2 0.0012 3T3 fibroblasts CACACACACA (106) 17.5 0.0175 3T3 fibroblasts CTTGGAAGGC (3) 3.5 0.0035 E15 cortex CACACACACA (106) 4.9 0.0049 P1 cortex CACACACACA (106) 27.3 0.0273 Hypothalamus CACACACACA (106) 96 0.096 Hypothalamus TGGGATCCCT (4) 1.8 0.0018 E12.5 retina CACACACACA (106) 3.8 0.0038 E12.5 retina GCAGAGGCAG (2) 1.9 0.0019 E14.5 retina CACACACACA (106) 18.2 0.0182 E14.5 retina CTTGGAAGGC (3) 1.8 0.0018 E14.5 retina GCAGAGGCAG (2) 1.8 0.0018 E14.5 retina TGGGATCCCT (4) 1.8 0.0018 E16.5 retina CACACACACA (106) 12.7 0.0127 E16.5 retina AAAAACATCT (5) 1.8 0.0018 E16.5 retina GCAGAGGCAG (2) 1.8 0.0018 E16.5 retina TCCTATAAGG 1.8 0.0018 E18.5 retina CACACACACA (106) 5.5 0.0055 E18.5 retina GCAGAGGCAG (2) 1.8 0.0018 P0.5 retina CACACACACA (106) 7.9 0.0079 P0.5 retina GCAGAGGCAG (2) 7.9 0.0079 P0.5 retina TGGGATCCCT (4) 5.9 0.0059 P0.5 retina AAAAACATCT (5) 2 0.002 P2.5 retina CACACACACA (106) 21.1 0.0211 P2.5 retina GCAGAGGCAG (2) 3.5 0.0035 P2.5 retina AAAAACATCT (5) 1.8 0.0018 P4.5 retina CACACACACA (106) 7.9 0.0079 P4.5 retina TGGGATCCCT (4) 2 0.002 P6.5 retina CACACACACA (106) 8.3 0.0083 P6.5 retina AAAAACATCT (5) 1.7 0.0017 P10.5 crx- retina AAAAACATCT (5) 5.6 0.0056 P10.5 crx- retina CACACACACA (106) 5.6 0.0056 P10.5 crx- retina TCCTATAAGG 1.9 0.0019 P10.5 crx- retina TGGGATCCCT (4) 1.9 0.0019 P10.5 crx+ retina AAAAACATCT (5) 7.7 0.0077 P10.5 crx+ retina CACACACACA (106) 7.7 0.0077 P10.5 crx+ retina GCAGAGGCAG (2) 5.8 0.0058 Adult retinal CACACACACA (106) 16.7 0.0167 ONL CACACACACA (106) 21.1 0.0211 ONL GCAGAGGCAG (2) 5.7 0.0057 ONL AAAAACATCT (5) 1.9 0.0019 ONL TCCTATAAGG 1.9 0.0019