Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34706	2900001A12Rik	RIKEN cDNA 2900001A12 gene	12		67107
Human Homolog	ANKRD12[ankyrin repeat domain 12]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 116 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC TTAAAAAAAA (80) 13.1 0.0131 P8 Cb GC AGTTTATTTT (2) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma TTAAAAAAAA (80) 53.2 0.0532 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma AGTTTATTTT (2) 4.6 0.0046 Cb medulloblastoma GAAACTTTAA (2) 4.6 0.0046 Cb medulloblastoma TGTTTGAGTT (3) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TTAAAAAAAA (80) 28.5 0.0285 P8 GC+1d culture TGTTTGAGTT (3) 6.8 0.0068 P8 GC+1d culture ATGTTGGAAT 2.3 0.0023 P8 GC+1d culture TTATTTAATA (2) 2.3 0.0023 P8 GC+1d culture GGGCCAGAAA 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture TTAAAAAAAA (80) 34 0.034 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture TGTTTGAGTT (3) 3.5 0.0035 P8 GC+SHH+1d culture TTATTTAATA (2) 2.3 0.0023 P8 GC+SHH+1d culture AGTTTATTTT (2) 1.2 0.0012 P8 GC+SHH+1d culture ATGTTGGAAT 1.2 0.0012 P8 GC+SHH+1d culture CATAAAAGTC 1.2 0.0012 P8 GC+SHH+1d culture GAAACTTTAA (2) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts GGGCCAGAAA 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex CATAAAAGTC 4.9 0.0049 E15 cortex GAAACTTTAA (2) 4.9 0.0049 E15 cortex TCTCAAAAGA (5) 4.9 0.0049 E15 cortex TTAAAAAAAA (80) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex TTAAAAAAAA (80) 13.6 0.0136 P1 cortex AGAAAGCTCT (2) 9.1 0.0091 P1 cortex ATGTTGGAAT 9.1 0.0091 P1 cortex TCTCAAAAGA (5) 4.5 0.0045 P1 cortex TTATTTAATA (2) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus TTAAAAAAAA (80) 19.9 0.0199 Hypothalamus ATGTTGGAAT 3.6 0.0036 Hypothalamus TGTTTGAGTT (3) 3.6 0.0036 Hypothalamus AGTTTATTTT (2) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina TTAAAAAAAA (80) 11.3 0.0113 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina TTAAAAAAAA (80) 16.4 0.0164 E14.5 retina TGTTTGAGTT (3) 3.6 0.0036 E14.5 retina ATGTTGGAAT 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina TTAAAAAAAA (80) 16.3 0.0163 E16.5 retina AGTTTATTTT (2) 3.6 0.0036 E16.5 retina TGTTTGAGTT (3) 3.6 0.0036 E16.5 retina ATGTTGGAAT 1.8 0.0018 E16.5 retina CATAAAAGTC 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina TTAAAAAAAA (80) 50.9 0.0509 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina TGTTTGAGTT (3) 7.3 0.0073 E18.5 retina TTATTTAATA (2) 3.6 0.0036 E18.5 retina AGAAAGCTCT (2) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina TTAAAAAAAA (80) 17.7 0.0177 P0.5 retina AGTTTATTTT (2) 2 0.002 P0.5 retina TGTTTGAGTT (3) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina TTAAAAAAAA (80) 40.5 0.0405 P2.5 retina AAAGATCCCT (8) 1.8 0.0018 P2.5 retina AGTTTATTTT (2) 1.8 0.0018 P2.5 retina TCTCAAAAGA (5) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina TTAAAAAAAA (80) 47.6 0.0476 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina TTATTTAATA (2) 4 0.004 P4.5 retina GAAACTTTAA (2) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina TTAAAAAAAA (80) 16.7 0.0167 P6.5 retina GAAACTTTAA (2) 3.3 0.0033 P6.5 retina TTATTTAATA (2) 3.3 0.0033 P6.5 retina AGTTTATTTT (2) 1.7 0.0017 P6.5 retina ATGTTGGAAT 1.7 0.0017 P6.5 retina TCTCAAAAGA (5) 1.7 0.0017 P6.5 retina TGTTTGAGTT (3) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina TTAAAAAAAA (80) 13 0.013 P10.5 crx- retina TGTTTGAGTT (3) 3.7 0.0037 P10.5 crx- retina AAAGATCCCT (8) 1.9 0.0019 P10.5 crx- retina ATGTTGGAAT 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina ATGTTGGAAT 5.8 0.0058 P10.5 crx+ retina TTAAAAAAAA (80) 5.8 0.0058 P10.5 crx+ retina GAAACTTTAA (2) 3.8 0.0038 P10.5 crx+ retina GGGCCAGAAA 3.8 0.0038 P10.5 crx+ retina TGTTTGAGTT (3) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal TTAAAAAAAA (80) 7.4 0.0074 Adult retinal TGTTTGAGTT (3) 3.7 0.0037 Adult retinal AAAGATCCCT (8) 1.9 0.0019 Adult retinal TCTCAAAAGA (5) 1.9 0.0019 Adult retinal TTATTTAATA (2) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL TTAAAAAAAA (80) 7.7 0.0077