Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.347444	Hsf1	heat shock factor 1	15	15 43.0 cM	15499
Gene Ontology	cytoplasm | DNA binding | nucleus | pronucleus | protein folding | regulation of transcription, DNA-dependent | response to unfolded protein | spermatogenesis | transcription factor activity
Human Homolog	HSF1[heat shock transcription factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTGGTCCTA (3) 3.3 0.0033 P8 Cb GC TGGCCCCGGG (2) 3.3 0.0033 Cb medulloblastoma TGGCCCCGGG (2) 11.6 0.0116 P8 GC+1d culture AGAGTCCCCT 3.4 0.0034 P8 GC+1d culture GCTGGTCCTA (3) 1.1 0.0011 P8 GC+SHH+1d culture AGAGTCCCCT 2.3 0.0023 P8 GC+SHH+1d culture TGGCCCCGGG (2) 1.2 0.0012 3T3 fibroblasts AGAGTCCCCT 3.5 0.0035 E15 cortex TGGCCCCGGG (2) 14.8 0.0148 E12.5 retina AGAGTCCCCT 3.8 0.0038 E12.5 retina TGGCCCCGGG (2) 1.9 0.0019 E14.5 retina AGAGTCCCCT 5.5 0.0055 E14.5 retina AGCGTCTGCA (15) 1.8 0.0018 E16.5 retina AGAGTCCCCT 7.2 0.0072 E16.5 retina GCTGGTCCTA (3) 1.8 0.0018 E16.5 retina TGGCCCCGGG (2) 1.8 0.0018 E18.5 retina AGAGTCCCCT 7.3 0.0073 E18.5 retina TGGCCCCGGG (2) 3.6 0.0036 E18.5 retina GCTGGTCCTA (3) 1.8 0.0018 P0.5 retina TGGCCCCGGG (2) 3.9 0.0039 P0.5 retina AGAGTCCCCT 2 0.002 P0.5 retina GCTGGTCCTA (3) 2 0.002 P2.5 retina TGGCCCCGGG (2) 7 0.007 P2.5 retina AGAGTCCCCT 1.8 0.0018 P4.5 retina AGAGTCCCCT 13.9 0.0139 P4.5 retina TGGCCCCGGG (2) 2 0.002 P6.5 retina AGAGTCCCCT 6.7 0.0067 P6.5 retina AGCGTCTGCA (15) 1.7 0.0017 P6.5 retina TGGCCCCGGG (2) 1.7 0.0017 P10.5 crx- retina AGAGTCCCCT 3.7 0.0037 P10.5 crx+ retina AGCGTCTGCA (15) 13.5 0.0135 P10.5 crx+ retina TGGCCCCGGG (2) 5.8 0.0058 Adult retinal AGCGTCTGCA (15) 42.6 0.0426 Adult retinal AGAGTCCCCT 1.9 0.0019 Adult retinal TGGCCCCGGG (2) 1.9 0.0019 ONL AGCGTCTGCA (15) 67 0.067 ONL AGAGTCCCCT 9.6 0.0096