Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.347513
5230400J09Rik
RIKEN cDNA 5230400J09 gene
3
209584
Human Homolog
LOC127253[hypothetical protein BC009514]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGAGCAGAGG
(
7
)
3.3
0.0033
P8 Cb GC
TGGGAAGTGT (
8
)
3.3
0.0033
P8 Cb GC
GGAGCAAGAG (
3
)
1.6
0.0016
Cb medulloblastoma
TGGGAAGTGT (
8
)
2.3
0.0023
P8 GC+1d culture
TGGGAAGTGT (
8
)
20.5
0.0205
P8 GC+1d culture
GGAGCAGAGG
(
7
)
9.1
0.0091
P8 GC+1d culture
GGAGCAAGAG (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGGAAGTGT (
8
)
8.2
0.0082
P8 GC+SHH+1d culture
GGAGCAGAGG
(
7
)
4.7
0.0047
3T3 fibroblasts
GGAGCAGAGG
(
7
)
14
0.014
3T3 fibroblasts
TGGGAAGTGT (
8
)
10.5
0.0105
E15 cortex
GGAGCAGAGG
(
7
)
4.9
0.0049
E15 cortex
TGGGAAGTGT (
8
)
4.9
0.0049
P1 cortex
TGGGAAGTGT (
8
)
18.2
0.0182
P1 cortex
TGGGTGGGTC
9.1
0.0091
Hypothalamus
GGAGCAGAGG
(
7
)
3.6
0.0036
Hypothalamus
TGGGAAGTGT (
8
)
3.6
0.0036
E12.5 retina
TGGGAAGTGT (
8
)
9.4
0.0094
E12.5 retina
GGAGCAGAGG
(
7
)
3.8
0.0038
E14.5 retina
TGGGAAGTGT (
8
)
12.8
0.0128
E14.5 retina
GGAGCAGAGG
(
7
)
7.3
0.0073
E16.5 retina
GGAGCAGAGG
(
7
)
5.4
0.0054
E16.5 retina
TGGGAAGTGT (
8
)
5.4
0.0054
E18.5 retina
TGGGAAGTGT (
8
)
7.3
0.0073
E18.5 retina
TGGGTGGGTC
3.6
0.0036
P0.5 retina
GGAGCAGAGG
(
7
)
9.8
0.0098
P0.5 retina
TGGGAAGTGT (
8
)
3.9
0.0039
P2.5 retina
TGGGAAGTGT (
8
)
5.3
0.0053
P2.5 retina
GGAGCAGAGG
(
7
)
3.5
0.0035
P4.5 retina
GGAGCAGAGG
(
7
)
4
0.004
P6.5 retina
TGGGTGGGTC
8.3
0.0083
P6.5 retina
GGAGCAGAGG
(
7
)
3.3
0.0033
P6.5 retina
GGAGCAAGAG (
3
)
1.7
0.0017
P10.5 crx- retina
TGGGAAGTGT (
8
)
3.7
0.0037
P10.5 crx- retina
GGAGCAGAGG
(
7
)
1.9
0.0019
P10.5 crx+ retina
TGGGAAGTGT (
8
)
3.8
0.0038
P10.5 crx+ retina
TGGGTGGGTC
3.8
0.0038
P10.5 crx+ retina
GGAGCAGAGG
(
7
)
1.9
0.0019
Adult retinal
GGAGCAGAGG
(
7
)
9.3
0.0093
Adult retinal
TGGGAAGTGT (
8
)
5.6
0.0056
Adult retinal
TGGGTGGGTC
5.6
0.0056
ONL
GGAGCAGAGG
(
7
)
1.9
0.0019
