Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3484	Npc1	Niemann Pick type C1	18	18 4.0 cM	18145
Gene Ontology	cholesterol transport | hedgehog receptor activity | integral to membrane | lysosome | membrane
Human Homolog	NPC1[Niemann-Pick disease, type C1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGGTCACCT (2) 4.9 0.0049 P8 Cb GC CTGTCTCCTT (3) 1.6 0.0016 Cb medulloblastoma TGGGTCACCT (2) 6.9 0.0069 P8 GC+1d culture CTGTCTCCTT (3) 2.3 0.0023 P8 GC+1d culture GGTTTTAACT (6) 2.3 0.0023 P8 GC+1d culture TGGGTCACCT (2) 2.3 0.0023 P8 GC+SHH+1d culture GGTTTTAACT (6) 3.5 0.0035 P8 GC+SHH+1d culture TGGGTCACCT (2) 3.5 0.0035 P8 GC+SHH+1d culture CTGTCTCCTT (3) 1.2 0.0012 P8 GC+SHH+1d culture CTTTTTTAAA (9) 1.2 0.0012 P1 cortex CTTTTTTAAA (9) 4.5 0.0045 Hypothalamus GGTTTTAACT (6) 3.6 0.0036 E12.5 retina TGGGTCACCT (2) 5.6 0.0056 E12.5 retina CTTTTTTAAA (9) 1.9 0.0019 E12.5 retina GGTTTTAACT (6) 1.9 0.0019 E14.5 retina GGTTTTAACT (6) 10.9 0.0109 E14.5 retina CTTTTTTAAA (9) 3.6 0.0036 E14.5 retina CTGTCTCCTT (3) 1.8 0.0018 E14.5 retina TGGGTCACCT (2) 1.8 0.0018 E16.5 retina GGTTTTAACT (6) 5.4 0.0054 E16.5 retina TGGGTCACCT (2) 3.6 0.0036 E18.5 retina TGGGTCACCT (2) 5.5 0.0055 P0.5 retina CTTTTTTAAA (9) 3.9 0.0039 P0.5 retina CTGTCTCCTT (3) 2 0.002 P0.5 retina TGGGTCACCT (2) 2 0.002 P2.5 retina CTTTTTTAAA (9) 1.8 0.0018 P2.5 retina GGTTTTAACT (6) 1.8 0.0018 P2.5 retina TGGGTCACCT (2) 1.8 0.0018 P4.5 retina GGTTTTAACT (6) 4 0.004 P4.5 retina CTGTCTCCTT (3) 2 0.002 P4.5 retina CTTTTTTAAA (9) 2 0.002 P4.5 retina TGGGTCACCT (2) 2 0.002 P6.5 retina GGTTTTAACT (6) 3.3 0.0033 P6.5 retina CTGTCTCCTT (3) 1.7 0.0017 P6.5 retina CTTTTTTAAA (9) 1.7 0.0017 P6.5 retina TGGGTCACCT (2) 1.7 0.0017 P10.5 crx- retina CTTTTTTAAA (9) 1.9 0.0019 P10.5 crx+ retina GGTTTTAACT (6) 1.9 0.0019 ONL CTGTCTCCTT (3) 3.8 0.0038 ONL CTTTTTTAAA (9) 1.9 0.0019 ONL GGTTTTAACT (6) 1.9 0.0019