Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3485	Hpxn	hemopexin	7		15458
Gene Ontology	acute-phase response | extracellular space | transport
Human Homolog	HPX[hemopexin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 176 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC ACTGCTTTTC (2) 27.7 0.0277 P8 Cb GC CTGAGCTGCA (4) 11.4 0.0114 P8 Cb GC TTTTTTTTCC (11) 11.4 0.0114 P8 Cb GC CTGTGCTTTA (3) 4.9 0.0049 P8 Cb GC GGAAAATTAG (2) 4.9 0.0049 P8 Cb GC GTGAAGGAAG (8) 4.9 0.0049 P8 Cb GC AAAAACAAAA (12) 1.6 0.0016 P8 Cb GC GCTAGGAAAG (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AAAAACAAAA (12) 37 0.037 Cb medulloblastoma ACTGCTTTTC (2) 25.4 0.0254 Cb medulloblastoma CTGAGCTGCA (4) 4.6 0.0046 Cb medulloblastoma TTTTTTTTCC (11) 4.6 0.0046 Cb medulloblastoma CTGTGCTTTA (3) 2.3 0.0023 Cb medulloblastoma GTGAAGGAAG (8) 2.3 0.0023 Cb medulloblastoma GTGTCGTTTC (2) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CTGAGCTGCA (4) 24 0.024 P8 GC+1d culture ACTGCTTTTC (2) 18.3 0.0183 P8 GC+1d culture AAAAACAAAA (12) 8 0.008 P8 GC+1d culture TGTGTGTGTA (16) 4.6 0.0046 P8 GC+1d culture GTGAAGGAAG (8) 3.4 0.0034 P8 GC+1d culture GGCCCAAATT (4) 2.3 0.0023 P8 GC+1d culture TTTTTTTTCC (11) 2.3 0.0023 P8 GC+1d culture CTCATCACTG (3) 1.1 0.0011 P8 GC+1d culture CTGTGCTTTA (3) 1.1 0.0011 P8 GC+1d culture TAATACCCCC (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CTGAGCTGCA (4) 16.4 0.0164 P8 GC+SHH+1d culture ACTGCTTTTC (2) 15.2 0.0152 P8 GC+SHH+1d culture AAAAACAAAA (12) 14.1 0.0141 P8 GC+SHH+1d culture CTGTGCTTTA (3) 5.9 0.0059 P8 GC+SHH+1d culture TTTTTTTTCC (11) 5.9 0.0059 P8 GC+SHH+1d culture GGCCCAAATT (4) 3.5 0.0035 P8 GC+SHH+1d culture GTGAAGGAAG (8) 2.3 0.0023 P8 GC+SHH+1d culture GAAATAGCAC (4) 1.2 0.0012 P8 GC+SHH+1d culture GCTAGGAAAG (3) 1.2 0.0012 P8 GC+SHH+1d culture GGTGTGGGGG (9) 1.2 0.0012 P8 GC+SHH+1d culture GGTTCCCACC (7) 1.2 0.0012 P8 GC+SHH+1d culture TAATACCCCC (2) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CTGAGCTGCA (4) 10.5 0.0105 3T3 fibroblasts ACTGCTTTTC (2) 3.5 0.0035 3T3 fibroblasts CTGTGCTTTA (3) 3.5 0.0035 3T3 fibroblasts TTTTTTTTCC (11) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex ACTGCTTTTC (2) 9.9 0.0099 E15 cortex CTGAGCTGCA (4) 9.9 0.0099 E15 cortex AAAAACAAAA (12) 4.9 0.0049 E15 cortex TGTGTGTGTA (16) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CTGAGCTGCA (4) 9.1 0.0091 P1 cortex AAAAACAAAA (12) 4.5 0.0045 P1 cortex GTGTCGTTTC (2) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TGTTCTTCCC (4) 19.9 0.0199 Hypothalamus TTTTTTTTCC (11) 12.7 0.0127 Hypothalamus ACTGCTTTTC (2) 9.1 0.0091 Hypothalamus CTGAGCTGCA (4) 5.4 0.0054 Hypothalamus AAAAACAAAA (12) 3.6 0.0036 Hypothalamus CTGTGCTTTA (3) 1.8 0.0018 Hypothalamus GAAATAGCAC (4) 1.8 0.0018 Hypothalamus GGCCCAAATT (4) 1.8 0.0018 Hypothalamus GGTTCCCACC (7) 1.8 0.0018 Hypothalamus TGTGTGTGTA (16) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina ACTGCTTTTC (2) 24.4 0.0244 E12.5 retina CTGAGCTGCA (4) 16.9 0.0169 E12.5 retina AAAAACAAAA (12) 13.1 0.0131 E12.5 retina CTGTGCTTTA (3) 7.5 0.0075 E12.5 retina GGTGTGGGGG (9) 1.9 0.0019 E12.5 retina GTGAAGGAAG (8) 1.9 0.0019 E12.5 retina TTTTTTTTCC (11) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina CTGAGCTGCA (4) 18.2 0.0182 E14.5 retina TTTTTTTTCC (11) 18.2 0.0182 E14.5 retina ACTGCTTTTC (2) 10.9 0.0109 E14.5 retina AAAAACAAAA (12) 5.5 0.0055 E14.5 retina TAATACCCCC (2) 5.5 0.0055 E14.5 retina CTGTGCTTTA (3) 3.6 0.0036 E14.5 retina CTCATCACTG (3) 1.8 0.0018 E14.5 retina GGAAAATTAG (2) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TTTTTTTTCC (11) 36.2 0.0362 E16.5 retina ACTGCTTTTC (2) 23.5 0.0235 E16.5 retina CTGAGCTGCA (4) 21.7 0.0217 E16.5 retina CTGTGCTTTA (3) 10.9 0.0109 E16.5 retina GGAAAATTAG (2) 3.6 0.0036 E16.5 retina GCTAGGAAAG (3) 1.8 0.0018 E16.5 retina GGCCCAAATT (4) 1.8 0.0018 E16.5 retina TAATACCCCC (2) 1.8 0.0018 E16.5 retina TGTGTGTGTA (16) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina ACTGCTTTTC (2) 21.8 0.0218 E18.5 retina CTGAGCTGCA (4) 21.8 0.0218 E18.5 retina TTTTTTTTCC (11) 21.8 0.0218 E18.5 retina AAAAACAAAA (12) 3.6 0.0036 E18.5 retina GGAAAATTAG (2) 1.8 0.0018 E18.5 retina GGTTCCCACC (7) 1.8 0.0018 E18.5 retina GTGTCGTTTC (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CTGAGCTGCA (4) 17.7 0.0177 P0.5 retina CTGTGCTTTA (3) 9.8 0.0098 P0.5 retina ACTGCTTTTC (2) 7.9 0.0079 P0.5 retina TGTGTGTGTA (16) 7.9 0.0079 P0.5 retina GGTTCCCACC (7) 3.9 0.0039 P0.5 retina TTTTTTTTCC (11) 3.9 0.0039 P0.5 retina AAAAACAAAA (12) 2 0.002 P0.5 retina GGCCCAAATT (4) 2 0.002 P0.5 retina TAATACCCCC (2) 2 0.002 P0.5 retina TTGAGCTGCA (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CTGAGCTGCA (4) 26.4 0.0264 P2.5 retina ACTGCTTTTC (2) 12.3 0.0123 P2.5 retina CTGTGCTTTA (3) 5.3 0.0053 P2.5 retina GGAAAATTAG (2) 5.3 0.0053 P2.5 retina TTTTTTTTCC (11) 5.3 0.0053 P2.5 retina AAAAACAAAA (12) 3.5 0.0035 P2.5 retina TAATACCCCC (2) 3.5 0.0035 P2.5 retina GGTTCCCACC (7) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina CTGAGCTGCA (4) 33.7 0.0337 P4.5 retina ACTGCTTTTC (2) 23.8 0.0238 P4.5 retina TTTTTTTTCC (11) 9.9 0.0099 P4.5 retina AAAAACAAAA (12) 4 0.004 P4.5 retina CTGTGCTTTA (3) 2 0.002 P4.5 retina GGTGTGGGGG (9) 2 0.002 P4.5 retina TGTGTGTGTA (16) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CTGAGCTGCA (4) 26.7 0.0267 P6.5 retina ACTGCTTTTC (2) 15 0.015 P6.5 retina CTGTGCTTTA (3) 10 0.01 P6.5 retina TGTGTGTGTA (16) 5 0.005 P6.5 retina GGAAAATTAG (2) 3.3 0.0033 P6.5 retina GTGAAGGAAG (8) 3.3 0.0033 P6.5 retina TTTTTTTTCC (11) 3.3 0.0033 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina ACTGCTTTTC (2) 33.4 0.0334 P10.5 crx- retina CTGAGCTGCA (4) 33.4 0.0334 P10.5 crx- retina CTGTGCTTTA (3) 13 0.013 P10.5 crx- retina TGTGTGTGTA (16) 5.6 0.0056 P10.5 crx- retina AAAAACAAAA (12) 1.9 0.0019 P10.5 crx- retina CTCATCACTG (3) 1.9 0.0019 P10.5 crx- retina GAAATAGCAC (4) 1.9 0.0019 P10.5 crx- retina GTGAAGGAAG (8) 1.9 0.0019 P10.5 crx- retina GTGTCGTTTC (2) 1.9 0.0019 P10.5 crx- retina TAATACCCCC (2) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CTGAGCTGCA (4) 32.7 0.0327 P10.5 crx+ retina ACTGCTTTTC (2) 25 0.025 P10.5 crx+ retina CTGTGCTTTA (3) 7.7 0.0077 P10.5 crx+ retina GAAATAGCAC (4) 7.7 0.0077 P10.5 crx+ retina TTGAGCTGCA (2) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTCC (11) 3.8 0.0038 P10.5 crx+ retina GGTGTGGGGG (9) 1.9 0.0019 P10.5 crx+ retina GTGTCGTTTC (2) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CTGAGCTGCA (4) 25.9 0.0259 Adult retinal ACTGCTTTTC (2) 11.1 0.0111 Adult retinal TGTGTGTGTA (16) 7.4 0.0074 Adult retinal CTGTGCTTTA (3) 3.7 0.0037 Adult retinal AAAAACAAAA (12) 1.9 0.0019 Adult retinal GAAATAGCAC (4) 1.9 0.0019 Adult retinal GTGTCGTTTC (2) 1.9 0.0019 Adult retinal TTTTTTTTCC (11) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL ACTGCTTTTC (2) 9.6 0.0096 ONL AAAAACAAAA (12) 3.8 0.0038 ONL GTGTCGTTTC (2) 3.8 0.0038 ONL TGTGTGTGTA (16) 3.8 0.0038 ONL CTGAGCTGCA (4) 1.9 0.0019 ONL CTGTGCTTTA (3) 1.9 0.0019 ONL GAAATAGCAC (4) 1.9 0.0019 ONL GGTTCCCACC (7) 1.9 0.0019 ONL TTTTTTTTCC (11) 1.9 0.0019