Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34855	4930509H03Rik	RIKEN cDNA 4930509H03 gene	3		75107
Mm.34855	A530041M06Rik	RIKEN cDNA A530041M06 gene	3		399576
Mm.34855	Lrig2	leucine-rich repeats and immunoglobulin-like domains 2	3	3 F2.2	269473
Human Homolog	LRIG2[leucine-rich repeats and immunoglobulin-like domains 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 8 In Situ Hybridization Images

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SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTGTGTG (115) 27.7 0.0277 P8 Cb GC TGTTCGTCCT (3) 6.5 0.0065 P8 Cb GC AGAAGGAAAA (10) 1.6 0.0016 P8 Cb GC TTAGGCAAGC (4) 1.6 0.0016 P8 Cb GC TTTAAATAAA (8) 1.6 0.0016 Cb medulloblastoma TGTGTGTGTG (115) 30.1 0.0301 Cb medulloblastoma CTTTTTTTCA (9) 2.3 0.0023 Cb medulloblastoma GCTTGCTCAG (14) 2.3 0.0023 P8 GC+1d culture TGTGTGTGTG (115) 27.4 0.0274 P8 GC+1d culture TGTTCGTCCT (3) 6.8 0.0068 P8 GC+1d culture TTAGGCAAGC (4) 2.3 0.0023 P8 GC+1d culture TTTAAATAAA (8) 2.3 0.0023 P8 GC+1d culture CTCAGGGGAG (3) 1.1 0.0011 P8 GC+1d culture CTTTTTTTCA (9) 1.1 0.0011 P8 GC+SHH+1d culture TGTGTGTGTG (115) 28.1 0.0281 P8 GC+SHH+1d culture CTTTTTTTCA (9) 1.2 0.0012 P8 GC+SHH+1d culture TGTTCGTCCT (3) 1.2 0.0012 P8 GC+SHH+1d culture TTAGGCAAGC (4) 1.2 0.0012 3T3 fibroblasts TGTGTGTGTG (115) 28 0.028 E15 cortex TGTTCGTCCT (3) 9.9 0.0099 E15 cortex CGCAGACAAG (3) 4.9 0.0049 E15 cortex GCTTGCTCAG (14) 4.9 0.0049 P1 cortex TGTGTGTGTG (115) 18.2 0.0182 P1 cortex TTTAAATAAA (8) 4.5 0.0045 Hypothalamus TGTGTGTGTG (115) 25.4 0.0254 Hypothalamus TGTTCGTCCT (3) 1.8 0.0018 E12.5 retina TGTGTGTGTG (115) 43.2 0.0432 E12.5 retina CGCAGACAAG (3) 1.9 0.0019 E12.5 retina GCTTGCTCAG (14) 1.9 0.0019 E12.5 retina TGTTCGTCCT (3) 1.9 0.0019 E14.5 retina TGTGTGTGTG (115) 54.7 0.0547 E14.5 retina GCTTGCTCAG (14) 3.6 0.0036 E14.5 retina CTTTTTTTCA (9) 1.8 0.0018 E16.5 retina TGTGTGTGTG (115) 39.8 0.0398 E16.5 retina TGTTCGTCCT (3) 1.8 0.0018 E18.5 retina TGTGTGTGTG (115) 47.3 0.0473 E18.5 retina TGTTCGTCCT (3) 3.6 0.0036 P0.5 retina TGTGTGTGTG (115) 21.6 0.0216 P0.5 retina CGCAGACAAG (3) 3.9 0.0039 P0.5 retina TGTTCGTCCT (3) 2 0.002 P2.5 retina TGTGTGTGTG (115) 35.2 0.0352 P2.5 retina CTTTTTTTCA (9) 3.5 0.0035 P2.5 retina TGTTCGTCCT (3) 1.8 0.0018 P2.5 retina TTAGGCAAGC (4) 1.8 0.0018 P2.5 retina TTTAAATAAA (8) 1.8 0.0018 P4.5 retina TGTGTGTGTG (115) 47.6 0.0476 P4.5 retina TGTTCGTCCT (3) 5.9 0.0059 P4.5 retina TTTAAATAAA (8) 2 0.002 P6.5 retina TGTGTGTGTG (115) 41.7 0.0417 P6.5 retina AGAAGGAAAA (10) 5 0.005 P6.5 retina TGTTCGTCCT (3) 5 0.005 P6.5 retina CTCAGGGGAG (3) 1.7 0.0017 P6.5 retina TTTAAATAAA (8) 1.7 0.0017 P10.5 crx- retina TGTGTGTGTG (115) 59.4 0.0594 P10.5 crx- retina CTTTTTTTCA (9) 3.7 0.0037 P10.5 crx- retina GCTTGCTCAG (14) 1.9 0.0019 P10.5 crx- retina TGTTCGTCCT (3) 1.9 0.0019 P10.5 crx+ retina TGTGTGTGTG (115) 44.2 0.0442 P10.5 crx+ retina TGTTCGTCCT (3) 13.5 0.0135 P10.5 crx+ retina CTCAGGGGAG (3) 1.9 0.0019 Adult retinal TGTGTGTGTG (115) 53.7 0.0537 Adult retinal TGTTCGTCCT (3) 11.1 0.0111 Adult retinal GCTTGCTCAG (14) 1.9 0.0019 ONL TGTGTGTGTG (115) 23 0.023 ONL TGTTCGTCCT (3) 5.7 0.0057 ONL GCTTGCTCAG (14) 1.9 0.0019