Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.34871
Idb2
inhibitor of DNA binding 2
12
12 B (12 7.0 cM)
15902
Mm.34871
C78922
expressed sequence C78922
12
97802
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 9 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 88 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
GGGAGCGAAA
(
4
)
13.1
0.0131
P8 Cb GC
GTGGGAATAG
(
3
)
6.5
0.0065
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
GGGAGCGAAA
(
4
)
39.3
0.0393
Cb medulloblastoma
GTGGGAATAG
(
3
)
6.9
0.0069
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
GGGAGCGAAA
(
4
)
21.7
0.0217
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
GTGGGAATAG
(
3
)
10.3
0.0103
P8 GC+1d culture
AACGACTGCT
(
4
)
2.3
0.0023
P8 GC+1d culture
GGAGCGAAAA (
7
)
1.1
0.0011
P8 GC+1d culture
TAGCAGACTT (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
GGGAGCGAAA
(
4
)
23.4
0.0234
P8 GC+SHH+1d culture
GTGGGAATAG
(
3
)
7
0.007
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
AACGACTGCT
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GGAGCGAAAA (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
TAGCAGACTT (
3
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GGGAGCGAAA
(
4
)
7
0.007
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GGGAGCGAAA
(
4
)
54.4
0.0544
E15 cortex
GTGGGAATAG
(
3
)
24.7
0.0247
E15 cortex
AACGACTGCT
(
4
)
9.9
0.0099
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
GGGAGCGAAA
(
4
)
9.1
0.0091
P1 cortex
GTGGGAATAG
(
3
)
4.5
0.0045
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
GGGAGCGAAA
(
4
)
12.7
0.0127
Hypothalamus
GTGGGAATAG
(
3
)
9.1
0.0091
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
Hypothalamus
AACGACTGCT
(
4
)
3.6
0.0036
Hypothalamus
GGGGGGAAGC
(
2
)
1.8
0.0018
Hypothalamus
TAGCAGACTT (
3
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GGGAGCGAAA
(
4
)
18.8
0.0188
E12.5 retina
GTGGGAATAG
(
3
)
7.5
0.0075
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E12.5 retina
GGAGCGAAAA (
7
)
3.8
0.0038
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
GGGAGCGAAA
(
4
)
31
0.031
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E14.5 retina
GTGGGAATAG
(
3
)
3.6
0.0036
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
GGGAGCGAAA
(
4
)
29
0.029
E16.5 retina
GTGGGAATAG
(
3
)
5.4
0.0054
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
GGGAGCGAAA
(
4
)
18.2
0.0182
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
E18.5 retina
GTGGGAATAG
(
3
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
GGGAGCGAAA
(
4
)
25.5
0.0255
P0.5 retina
GTGGGAATAG
(
3
)
17.7
0.0177
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P0.5 retina
AACGACTGCT
(
4
)
2
0.002
P0.5 retina
GGGGGGAAGC
(
2
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
GGGAGCGAAA
(
4
)
14.1
0.0141
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
GTGGGAATAG
(
3
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
GGGAGCGAAA
(
4
)
11.9
0.0119
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
GGGAGCGAAA
(
4
)
3.3
0.0033
P6.5 retina
GGGGGGAAGC
(
2
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
GGGAGCGAAA
(
4
)
14.9
0.0149
P10.5 crx- retina
GTGGGAATAG
(
3
)
3.7
0.0037
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
P10.5 crx+ retina
GGGAGCGAAA
(
4
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
GGGAGCGAAA
(
4
)
1.9
0.0019
Adult retinal
GTGGGAATAG
(
3
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
ONL
GGGAGCGAAA
(
4
)
1.9
0.0019
ONL
TAGCAGACTT (
3
)
1.9
0.0019
