Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.34916
Hace1
HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
10
209462
Mm.34916
1700042J16Rik
RIKEN cDNA 1700042J16 gene
10
73291
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTCAGAGAGA
(
6
)
3.3
0.0033
P8 Cb GC
TGTGTGTATA
(
4
)
1.6
0.0016
P8 Cb GC
TTTTGTTTTT (
9
)
1.6
0.0016
Cb medulloblastoma
GTGGCCTTTG (
8
)
2.3
0.0023
Cb medulloblastoma
TTTTGTTTTT (
9
)
2.3
0.0023
P8 GC+1d culture
GTCAGAGAGA
(
6
)
1.1
0.0011
P8 GC+1d culture
TATCAAAATA (
4
)
1.1
0.0011
P8 GC+1d culture
TGTGTGTATA
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTTGTTTTT (
9
)
4.7
0.0047
P8 GC+SHH+1d culture
GTCAGAGAGA
(
6
)
3.5
0.0035
P8 GC+SHH+1d culture
GTGGCCTTTG (
8
)
1.2
0.0012
E15 cortex
GTCAGAGAGA
(
6
)
14.8
0.0148
P1 cortex
TTTTGTTTTT (
9
)
9.1
0.0091
Hypothalamus
GTGGCCTTTG (
8
)
1.8
0.0018
Hypothalamus
TTTTGTTTTT (
9
)
1.8
0.0018
E12.5 retina
GTCAGAGAGA
(
6
)
5.6
0.0056
E12.5 retina
GTATAAAGTT
(
3
)
1.9
0.0019
E14.5 retina
TTTTGTTTTT (
9
)
3.6
0.0036
E14.5 retina
AAACTGAGCA (
5
)
1.8
0.0018
E14.5 retina
TATCAAAATA (
4
)
1.8
0.0018
E16.5 retina
AAACTGAGCA (
5
)
1.8
0.0018
E16.5 retina
TTTTGTTTTT (
9
)
1.8
0.0018
E18.5 retina
TGTGTGTATA
(
4
)
3.6
0.0036
E18.5 retina
GTATAAAGTT
(
3
)
1.8
0.0018
E18.5 retina
TATCAAAATA (
4
)
1.8
0.0018
P0.5 retina
AAACTGAGCA (
5
)
2
0.002
P2.5 retina
TGTATGTATA
(
6
)
1.8
0.0018
P4.5 retina
AAACTGAGCA (
5
)
2
0.002
P4.5 retina
GTATAAAGTT
(
3
)
2
0.002
P4.5 retina
TTTTGTTTTT (
9
)
2
0.002
P6.5 retina
TATCAAAATA (
4
)
3.3
0.0033
P6.5 retina
AAACTGAGCA (
5
)
1.7
0.0017
P6.5 retina
GTGGCCTTTG (
8
)
1.7
0.0017
P6.5 retina
TGTATGTATA
(
6
)
1.7
0.0017
P10.5 crx- retina
AAACTGAGCA (
5
)
3.7
0.0037
P10.5 crx- retina
TGTGTGTATA
(
4
)
3.7
0.0037
P10.5 crx+ retina
GTATAAAGTT
(
3
)
1.9
0.0019
P10.5 crx+ retina
TGTATGTATA
(
6
)
1.9
0.0019
P10.5 crx+ retina
TTTTGTTTTT (
9
)
1.9
0.0019
Adult retinal
GTGGCCTTTG (
8
)
1.9
0.0019
ONL
TGTATGTATA
(
6
)
3.8
0.0038
ONL
TGTGTGTATA
(
4
)
1.9
0.0019
