Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.34951
D18Ertd643e
DNA segment, Chr 18, ERATO Doi 643, expressed
18
18 5.0 cM
52517
Mm.34951
Mrpl27
mitochondrial ribosomal protein L27
11
11 56.0 cM
94064
Mm.34951
A630055F16Rik
RIKEN cDNA A630055F16 gene
11
319612
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 75 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGGTTCACA (
32
)
14.7
0.0147
P8 Cb GC
GTGCCTCACA (
4
)
1.6
0.0016
Cb medulloblastoma
GTGGTTCACA (
32
)
11.6
0.0116
Cb medulloblastoma
GTGCCTCACA (
4
)
2.3
0.0023
P8 GC+1d culture
GTGGTTCACA (
32
)
18.3
0.0183
P8 GC+1d culture
GTGCCTCACA (
4
)
9.1
0.0091
P8 GC+1d culture
CTTTGAAGTC
(
5
)
2.3
0.0023
P8 GC+1d culture
GGTGGCTCAC (
9
)
2.3
0.0023
P8 GC+1d culture
TGTGGCTTGG (
10
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGGTTCACA (
32
)
31.6
0.0316
P8 GC+SHH+1d culture
GTGCCTCACA (
4
)
10.5
0.0105
P8 GC+SHH+1d culture
CTTTGAAGTC
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GGGTGGCTCA (
9
)
1.2
0.0012
P8 GC+SHH+1d culture
GGTGGCTCAC (
9
)
1.2
0.0012
3T3 fibroblasts
GTGGTTCACA (
32
)
17.5
0.0175
3T3 fibroblasts
GTGGGCTCAC (
14
)
3.5
0.0035
E15 cortex
GTGGGCTCAC (
14
)
9.9
0.0099
E15 cortex
GTGCCTCACA (
4
)
4.9
0.0049
E15 cortex
GTGGTTCACA (
32
)
4.9
0.0049
P1 cortex
GTGGTTCACA (
32
)
27.3
0.0273
P1 cortex
GGTGGCTCAC (
9
)
13.6
0.0136
P1 cortex
GTGCCTCACA (
4
)
4.5
0.0045
Hypothalamus
GTGGTTCACA (
32
)
12.7
0.0127
Hypothalamus
GGTGGCTCAC (
9
)
5.4
0.0054
Hypothalamus
GTGCCTCACA (
4
)
5.4
0.0054
Hypothalamus
GTGGGCTCAC (
14
)
3.6
0.0036
E12.5 retina
GTGGTTCACA (
32
)
28.2
0.0282
E12.5 retina
GTGCCTCACA (
4
)
13.1
0.0131
E12.5 retina
GGTGGCTCAC (
9
)
3.8
0.0038
E12.5 retina
GTGGGCTCAC (
14
)
1.9
0.0019
E14.5 retina
GTGGTTCACA (
32
)
51
0.051
E14.5 retina
GTGCCTCACA (
4
)
10.9
0.0109
E16.5 retina
GTGGTTCACA (
32
)
39.8
0.0398
E16.5 retina
GTGGGCTCAC (
14
)
5.4
0.0054
E16.5 retina
GGTGGCTCAC (
9
)
1.8
0.0018
E16.5 retina
GTGCCTCACA (
4
)
1.8
0.0018
E16.5 retina
TGTGGCTTGG (
10
)
1.8
0.0018
E18.5 retina
GTGGTTCACA (
32
)
40
0.04
E18.5 retina
GTGCCTCACA (
4
)
16.4
0.0164
E18.5 retina
GGTGGCTCAC (
9
)
3.6
0.0036
E18.5 retina
GGGTGGCTCA (
9
)
1.8
0.0018
P0.5 retina
GTGGTTCACA (
32
)
35.3
0.0353
P0.5 retina
GGTGGCTCAC (
9
)
11.8
0.0118
P0.5 retina
GTGGGCTCAC (
14
)
3.9
0.0039
P2.5 retina
GTGGTTCACA (
32
)
12.3
0.0123
P2.5 retina
GTGGGCTCAC (
14
)
5.3
0.0053
P2.5 retina
GGTGGCTCAC (
9
)
3.5
0.0035
P2.5 retina
TGTGGCTTGG (
10
)
3.5
0.0035
P4.5 retina
GTGGTTCACA (
32
)
33.7
0.0337
P4.5 retina
GTGGGCTCAC (
14
)
7.9
0.0079
P4.5 retina
GGTGGCTCAC (
9
)
4
0.004
P4.5 retina
GTGCCTCACA (
4
)
4
0.004
P4.5 retina
GGGTGGCTCA (
9
)
2
0.002
P6.5 retina
GTGGTTCACA (
32
)
25
0.025
P6.5 retina
GGTGGCTCAC (
9
)
5
0.005
P6.5 retina
GTGCCTCACA (
4
)
5
0.005
P6.5 retina
GTGGGCTCAC (
14
)
3.3
0.0033
P10.5 crx- retina
GTGGTTCACA (
32
)
20.4
0.0204
P10.5 crx- retina
GTGGGCTCAC (
14
)
5.6
0.0056
P10.5 crx- retina
GGTGGCTCAC (
9
)
3.7
0.0037
P10.5 crx- retina
GTGCCTCACA (
4
)
3.7
0.0037
P10.5 crx+ retina
GTGGTTCACA (
32
)
32.7
0.0327
P10.5 crx+ retina
GGTGGCTCAC (
9
)
7.7
0.0077
P10.5 crx+ retina
GTGGGCTCAC (
14
)
5.8
0.0058
P10.5 crx+ retina
GTGCCTCACA (
4
)
3.8
0.0038
P10.5 crx+ retina
GGGTGGCTCA (
9
)
1.9
0.0019
Adult retinal
GTGGTTCACA (
32
)
33.3
0.0333
Adult retinal
GGTGGCTCAC (
9
)
7.4
0.0074
Adult retinal
GTGCCTCACA (
4
)
7.4
0.0074
Adult retinal
GTGGGCTCAC (
14
)
7.4
0.0074
Adult retinal
GGGTGGCTCA (
9
)
1.9
0.0019
ONL
GTGGTTCACA (
32
)
32.6
0.0326
ONL
GGTGGCTCAC (
9
)
5.7
0.0057
ONL
GTGGGCTCAC (
14
)
5.7
0.0057
ONL
GGGTGGCTCA (
9
)
1.9
0.0019
