Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3496	Fnta	farnesyltransferase, CAAX box, alpha	8	8 8.0 cM	14272
Gene Ontology	acetylcholine receptor regulator activity | neurotransmitter receptor metabolism | prenyltransferase activity | protein amino acid prenylation | protein prenyltransferase activity | transferase activity
Human Homolog	FNTA[farnesyltransferase, CAAX box, alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTAATGT (3) 117.5 0.1175 Cb medulloblastoma TTTTTAATGT (3) 6.9 0.0069 P8 GC+1d culture TTTTTAATGT (3) 150.7 0.1507 P8 GC+1d culture GCCGTCCGTT (4) 2.3 0.0023 P8 GC+1d culture CTAGAAAACC (2) 1.1 0.0011 P8 GC+SHH+1d culture TTTTTAATGT (3) 134.7 0.1347 P8 GC+SHH+1d culture CTAGAAAACC (2) 3.5 0.0035 P8 GC+SHH+1d culture GCCGTCCGTT (4) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GCCGTCCGTT (4) 7 0.007 3T3 fibroblasts CTAGAAAACC (2) 3.5 0.0035 3T3 fibroblasts TTTTTAATGT (3) 3.5 0.0035 E15 cortex GCCGTCCGTT (4) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TTTTTAATGT (3) 4.9 0.0049 P1 cortex TTTTTAATGT (3) 63.6 0.0636 P1 cortex AGCCTGGACT (2) 4.5 0.0045 Hypothalamus TTTTTAATGT (3) 23.5 0.0235 Hypothalamus AGCCTGGACT (2) 1.8 0.0018 Hypothalamus CTAGAAAACC (2) 1.8 0.0018 E12.5 retina TTTTTAATGT (3) 80.7 0.0807 E14.5 retina TTTTTAATGT (3) 83.8 0.0838 E16.5 retina TTTTTAATGT (3) 108.7 0.1087 E18.5 retina TTTTTAATGT (3) 149.2 0.1492 E18.5 retina CTAGAAAACC (2) 3.6 0.0036 E18.5 retina AGCCTGGACT (2) 1.8 0.0018 P0.5 retina TTTTTAATGT (3) 55 0.055 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AGCCTGGACT (2) 2 0.002 P2.5 retina TTTTTAATGT (3) 132 0.132 P2.5 retina AGCCTGGACT (2) 3.5 0.0035 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina TTTTTAATGT (3) 132.8 0.1328 P4.5 retina CTAGAAAACC (2) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina TTTTTAATGT (3) 110 0.11 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina AGCCTGGACT (2) 1.7 0.0017 P10.5 crx- retina TTTTTAATGT (3) 107.8 0.1078 P10.5 crx- retina AGCCTGGACT (2) 1.9 0.0019 P10.5 crx+ retina TTTTTAATGT (3) 75 0.075 P10.5 crx+ retina AGCCTGGACT (2) 1.9 0.0019 Adult retinal TTTTTAATGT (3) 13 0.013 Adult retinal CTAGAAAACC (2) 3.7 0.0037 Adult retinal AGCCTGGACT (2) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL TTTTTAATGT (3) 63.2 0.0632 ONL GTCATAGCTG (590) 5.7 0.0057