Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.35006
5730530J16Rik
RIKEN cDNA 5730530J16 gene
8
70642
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 49 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
TGTCCTCCAA (
3
)
4.9
0.0049
P8 Cb GC
GCTGTGAACT (
5
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
GCTGTGAACT (
5
)
2.3
0.0023
Cb medulloblastoma
GGTTGTAAGG
(
2
)
2.3
0.0023
Cb medulloblastoma
TGTCCTCCAA (
3
)
2.3
0.0023
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
GCTGTGAACT (
5
)
1.1
0.0011
P8 GC+1d culture
GCTGTGAGCT (
4
)
1.1
0.0011
P8 GC+1d culture
TGTCCTCCAA (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
GGTTGTAAGG
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TGTCCTCCAA (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GCTGTGAACT (
5
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
GCTGTGAACT (
5
)
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
CACCTCCACT
(
3
)
4.9
0.0049
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
GCTGTGAGCT (
4
)
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
CACCTCCACT
(
3
)
1.8
0.0018
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
TGTCCTCCAA (
3
)
3.8
0.0038
E12.5 retina
GCTGTGAACT (
5
)
1.9
0.0019
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
GCTGTGAACT (
5
)
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
GCTGTGAACT (
5
)
5.4
0.0054
E16.5 retina
TACTCCACAA (
2
)
1.8
0.0018
E16.5 retina
TGTCCTCCAA (
3
)
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
GGTTGTAAGG
(
2
)
2
0.002
P0.5 retina
TGTCCTCCAA (
3
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
TGTCCTCCAA (
3
)
2
0.002
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
GCTGTGAGCT (
4
)
3.7
0.0037
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
CACCTCCACT
(
3
)
1.9
0.0019
P10.5 crx+ retina
TACTCCACAA (
2
)
1.9
0.0019
P10.5 crx+ retina
TGTCCTCCAA (
3
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
TACTCCACAA (
2
)
3.8
0.0038
