Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.35039
4932442K08Rik
RIKEN cDNA 4932442K08 gene
17
67544
Mm.35039
A430055H19Rik
RIKEN cDNA A430055H19 gene
17
319284
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 93 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTTACATTTC (
3
)
31
0.031
P8 Cb GC
AAAAAAATAA
(
7
)
1.6
0.0016
P8 Cb GC
GTGGAGCCTG
(
5
)
1.6
0.0016
Cb medulloblastoma
AAAAAAATAA
(
7
)
13.9
0.0139
Cb medulloblastoma
AGTACGTCAG
(
3
)
2.3
0.0023
Cb medulloblastoma
CTCTGCCCAG (
3
)
2.3
0.0023
Cb medulloblastoma
GAGTCAGGAG (
6
)
2.3
0.0023
Cb medulloblastoma
GTGGAGCCTG
(
5
)
2.3
0.0023
P8 GC+1d culture
CTTACATTTC (
3
)
13.7
0.0137
P8 GC+1d culture
CTCTGCCCAG (
3
)
3.4
0.0034
P8 GC+1d culture
AAAAAAATAA
(
7
)
2.3
0.0023
P8 GC+1d culture
AGGGAAAACA
(
2
)
2.3
0.0023
P8 GC+1d culture
GTGGAGCCTG
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
CTTACATTTC (
3
)
32.8
0.0328
P8 GC+SHH+1d culture
AAAAAAATAA
(
7
)
10.5
0.0105
P8 GC+SHH+1d culture
CTCTGCCCAG (
3
)
3.5
0.0035
P8 GC+SHH+1d culture
GAGTCAGGAG (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGGAGCCTG
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
AGTACGTCAG
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
ATCCAGAACA
(
3
)
1.2
0.0012
E15 cortex
TGCTGTCTCC (
8
)
9.9
0.0099
E15 cortex
AGGCCTAACC (
4
)
4.9
0.0049
P1 cortex
AAAAAAATAA
(
7
)
4.5
0.0045
P1 cortex
CTCTGCCCAG (
3
)
4.5
0.0045
P1 cortex
GTGGAGCCTG
(
5
)
4.5
0.0045
Hypothalamus
AAAAAAATAA
(
7
)
18.1
0.0181
Hypothalamus
TGCTGTCTCC (
8
)
5.4
0.0054
Hypothalamus
AGTACGTCAG
(
3
)
3.6
0.0036
E12.5 retina
CTTACATTTC (
3
)
33.8
0.0338
E12.5 retina
AAAAAAATAA
(
7
)
3.8
0.0038
E12.5 retina
CTCTGCCCAG (
3
)
3.8
0.0038
E12.5 retina
GTGGAGCCTG
(
5
)
1.9
0.0019
E14.5 retina
CTTACATTTC (
3
)
20
0.02
E14.5 retina
AAAAAAATAA
(
7
)
5.5
0.0055
E14.5 retina
AGTACGTCAG
(
3
)
1.8
0.0018
E14.5 retina
GTGGAGCCTG
(
5
)
1.8
0.0018
E16.5 retina
AAAAAAATAA
(
7
)
10.9
0.0109
E16.5 retina
CTTACATTTC (
3
)
10.9
0.0109
E16.5 retina
ATCCAGAACA
(
3
)
3.6
0.0036
E16.5 retina
AGTACGTCAG
(
3
)
1.8
0.0018
E16.5 retina
CTCTGCCCAG (
3
)
1.8
0.0018
E16.5 retina
GAGTCAGGAG (
6
)
1.8
0.0018
E16.5 retina
GTGGAGCCTG
(
5
)
1.8
0.0018
E16.5 retina
TTCTTCTTCC (
7
)
1.8
0.0018
E18.5 retina
CTTACATTTC (
3
)
27.3
0.0273
E18.5 retina
AAAAAAATAA
(
7
)
3.6
0.0036
E18.5 retina
AGGCCTAACC (
4
)
1.8
0.0018
E18.5 retina
AGGGAAAACA
(
2
)
1.8
0.0018
E18.5 retina
GAGTCAGGAG (
6
)
1.8
0.0018
E18.5 retina
GTGGAGCCTG
(
5
)
1.8
0.0018
E18.5 retina
TGCTGTCTCC (
8
)
1.8
0.0018
P0.5 retina
CTTACATTTC (
3
)
11.8
0.0118
P0.5 retina
CTCTGCCCAG (
3
)
5.9
0.0059
P0.5 retina
ATCCAGAACA
(
3
)
2
0.002
P0.5 retina
GAGTCAGGAG (
6
)
2
0.002
P0.5 retina
TGCTGTCTCC (
8
)
2
0.002
P2.5 retina
CTTACATTTC (
3
)
19.4
0.0194
P2.5 retina
TGCTGTCTCC (
8
)
5.3
0.0053
P2.5 retina
AAAAAAATAA
(
7
)
1.8
0.0018
P2.5 retina
AGGGAAAACA
(
2
)
1.8
0.0018
P2.5 retina
CTCTGCCCAG (
3
)
1.8
0.0018
P4.5 retina
CTTACATTTC (
3
)
13.9
0.0139
P4.5 retina
AAAAAAATAA
(
7
)
9.9
0.0099
P4.5 retina
ATCCAGAACA
(
3
)
2
0.002
P4.5 retina
CTCTGCCCAG (
3
)
2
0.002
P4.5 retina
GAGTCAGGAG (
6
)
2
0.002
P4.5 retina
GTGGAGCCTG
(
5
)
2
0.002
P6.5 retina
CTTACATTTC (
3
)
10
0.01
P6.5 retina
AAAAAAATAA
(
7
)
3.3
0.0033
P6.5 retina
CTCTGCCCAG (
3
)
3.3
0.0033
P6.5 retina
AGGGAAAACA
(
2
)
1.7
0.0017
P6.5 retina
AGTACGTCAG
(
3
)
1.7
0.0017
P6.5 retina
GAGTCAGGAG (
6
)
1.7
0.0017
P6.5 retina
TATGTTTTCA
(
5
)
1.7
0.0017
P10.5 crx- retina
ATCCAGAACA
(
3
)
13
0.013
P10.5 crx- retina
GTGGAGCCTG
(
5
)
11.1
0.0111
P10.5 crx+ retina
CTTACATTTC (
3
)
7.7
0.0077
P10.5 crx+ retina
CTCTGCCCAG (
3
)
5.8
0.0058
P10.5 crx+ retina
ATCCAGAACA
(
3
)
1.9
0.0019
P10.5 crx+ retina
TATGTTTTCA
(
5
)
1.9
0.0019
P10.5 crx+ retina
TGCTGTCTCC (
8
)
1.9
0.0019
P10.5 crx+ retina
TTCTTCTTCC (
7
)
1.9
0.0019
Adult retinal
AAAAAAATAA
(
7
)
5.6
0.0056
Adult retinal
CTCTGCCCAG (
3
)
3.7
0.0037
Adult retinal
AGGCCTAACC (
4
)
1.9
0.0019
Adult retinal
AGTACGTCAG
(
3
)
1.9
0.0019
Adult retinal
GAGTCAGGAG (
6
)
1.9
0.0019
Adult retinal
GTGGAGCCTG
(
5
)
1.9
0.0019
Adult retinal
TATGTTTTCA
(
5
)
1.9
0.0019
Adult retinal
TTCTTCTTCC (
7
)
1.9
0.0019
ONL
AAAAAAATAA
(
7
)
9.6
0.0096
ONL
CTTACATTTC (
3
)
3.8
0.0038
ONL
GAGTCAGGAG (
6
)
1.9
0.0019
