Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.35084	Snx19	sorting nexin 19	9		102607
Human Homolog	SNX19[sorting nexin 19]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC GCAAAAAAAA (50) 14.7 0.0147 P8 Cb GC GGGAAAGCCT 1.6 0.0016 P8 Cb GC TGGATTTGCT (2) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma GCAAAAAAAA (50) 60.1 0.0601 Cb medulloblastoma TGGGAGAGCC (3) 6.9 0.0069 Cb medulloblastoma GGGAAAGCCT 2.3 0.0023 Cb medulloblastoma TGGATTTGCT (2) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture GCAAAAAAAA (50) 12.6 0.0126 P8 GC+1d culture TGGGAGAGCC (3) 12.6 0.0126 P8 GC+1d culture GGGAAAGCCT 2.3 0.0023 P8 GC+1d culture TGGATTTGCT (2) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture GCAAAAAAAA (50) 29.3 0.0293 P8 GC+SHH+1d culture TGGGAGAGCC (3) 8.2 0.0082 P8 GC+SHH+1d culture GGGAAAGCCT 1.2 0.0012 P8 GC+SHH+1d culture TGGATTTGCT (2) 1.2 0.0012 3T3 fibroblasts GGGAAAGCCT 7 0.007 3T3 fibroblasts GCAAAAAAAA (50) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex TGGGAGAGCC (3) 14.8 0.0148 E15 cortex GCAAAAAAAA (50) 9.9 0.0099 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex GCAAAAAAAA (50) 4.5 0.0045 P1 cortex GGGAAAGCCT 4.5 0.0045 P1 cortex TGGGAGAGCC (3) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus GCAAAAAAAA (50) 19.9 0.0199 Hypothalamus GGGAAAGCCT 5.4 0.0054 Hypothalamus TGGGAGAGCC (3) 3.6 0.0036 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina GCAAAAAAAA (50) 9.4 0.0094 E12.5 retina GGGAAAGCCT 5.6 0.0056 E12.5 retina TGGGAGAGCC (3) 3.8 0.0038 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina GCAAAAAAAA (50) 12.8 0.0128 E14.5 retina TGGGAGAGCC (3) 3.6 0.0036 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina GCAAAAAAAA (50) 10.9 0.0109 E16.5 retina GGGAAAGCCT 7.2 0.0072 E16.5 retina TGGGAGAGCC (3) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina GCAAAAAAAA (50) 25.5 0.0255 E18.5 retina TGGGAGAGCC (3) 3.6 0.0036 E18.5 retina TGGATTTGCT (2) 1.8 0.0018 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina GCAAAAAAAA (50) 17.7 0.0177 P0.5 retina TGGGAGAGCC (3) 3.9 0.0039 P0.5 retina GGGAAAGCCT 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina GCAAAAAAAA (50) 22.9 0.0229 P2.5 retina TGGGAGAGCC (3) 5.3 0.0053 P2.5 retina TGGATTTGCT (2) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina GCAAAAAAAA (50) 25.8 0.0258 P4.5 retina TGGGAGAGCC (3) 11.9 0.0119 P4.5 retina GGGAAAGCCT 5.9 0.0059 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina GCAAAAAAAA (50) 11.7 0.0117 P6.5 retina TGGGAGAGCC (3) 10 0.01 P6.5 retina GGGAAAGCCT 8.3 0.0083 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina GCAAAAAAAA (50) 5.6 0.0056 P10.5 crx- retina GGGAAAGCCT 5.6 0.0056 P10.5 crx- retina TGGGAGAGCC (3) 5.6 0.0056 P10.5 crx- retina TGGATTTGCT (2) 3.7 0.0037 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina GGGAAAGCCT 7.7 0.0077 P10.5 crx+ retina TGGGAGAGCC (3) 7.7 0.0077 P10.5 crx+ retina GCAAAAAAAA (50) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal GCAAAAAAAA (50) 11.1 0.0111 Adult retinal TGGGAGAGCC (3) 9.3 0.0093 Adult retinal GGGAAAGCCT 5.6 0.0056 Adult retinal TGGATTTGCT (2) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL GCAAAAAAAA (50) 1.9 0.0019