Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.35134	Atp2a1	ATPase, Ca++ transporting, cardiac muscle, fast twitch 1	7	7 61.4 cM	11937
Gene Ontology	ATP binding | hydrolase activity | integral to membrane | regulation of muscle contraction | sarcoplasmic reticulum
Human Homolog	ATP2A1[ATPase, Ca++ transporting, cardiac muscle, fast twitch 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGGCTCTGG (7) 9.8 0.0098 P8 Cb GC CAGTGCACTG (5) 4.9 0.0049 P8 Cb GC CATTTTCAGC (6) 1.6 0.0016 Cb medulloblastoma GGGGCTCTGG (7) 11.6 0.0116 Cb medulloblastoma CAGTGCACTG (5) 2.3 0.0023 P8 GC+1d culture GGGGCTCTGG (7) 6.8 0.0068 P8 GC+1d culture CAGTGCACTG (5) 3.4 0.0034 P8 GC+1d culture GATCCAGCTC (2) 1.1 0.0011 P8 GC+SHH+1d culture GGGGCTCTGG (7) 11.7 0.0117 P8 GC+SHH+1d culture CAGTGCACTG (5) 4.7 0.0047 3T3 fibroblasts GGGGCTCTGG (7) 35 0.035 3T3 fibroblasts CAGTGCACTG (5) 3.5 0.0035 E15 cortex GGGGCTCTGG (7) 29.7 0.0297 P1 cortex GGGGCTCTGG (7) 9.1 0.0091 P1 cortex CAGTGCACTG (5) 4.5 0.0045 Hypothalamus GGGGCTCTGG (7) 10.9 0.0109 E12.5 retina GGGGCTCTGG (7) 5.6 0.0056 E12.5 retina CAGTGCACTG (5) 3.8 0.0038 E12.5 retina CATTTTCAGC (6) 1.9 0.0019 E14.5 retina GGGGCTCTGG (7) 1.8 0.0018 E18.5 retina GGGGCTCTGG (7) 10.9 0.0109 E18.5 retina CAGTGCACTG (5) 1.8 0.0018 P0.5 retina GGGGCTCTGG (7) 7.9 0.0079 P0.5 retina CAGTGCACTG (5) 2 0.002 P2.5 retina GGGGCTCTGG (7) 7 0.007 P4.5 retina GGGGCTCTGG (7) 9.9 0.0099 P6.5 retina GGGGCTCTGG (7) 6.7 0.0067 P6.5 retina CATTTTCAGC (6) 1.7 0.0017 P6.5 retina GATCCAGCTC (2) 1.7 0.0017 P10.5 crx- retina GGGGCTCTGG (7) 9.3 0.0093 P10.5 crx+ retina GGGGCTCTGG (7) 17.3 0.0173 P10.5 crx+ retina CAGTGCACTG (5) 1.9 0.0019 Adult retinal GGGGCTCTGG (7) 14.8 0.0148 Adult retinal CAGTGCACTG (5) 1.9 0.0019 Adult retinal GATCCAGCTC (2) 1.9 0.0019 ONL GGGGCTCTGG (7) 19.2 0.0192 ONL CAGTGCACTG (5) 1.9 0.0019 ONL GATCCAGCTC (2) 1.9 0.0019