Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.35389	Cycs	cytochrome c, somatic	6	6 23.0 cM	13063
Gene Ontology	caspase activation via cytochrome c | electron transport | electron transporter activity | heme binding | mitochondrial electron transport chain | mitochondrion | mitochondrion
Human Homolog	CYCS[cytochrome c, somatic]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 146 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATGTGGCTG (10) 101.1 0.1011 P8 Cb GC AATGGCTAGC 31 0.031 P8 Cb GC CTAAAAAAAA (20) 11.4 0.0114 P8 Cb GC GACTGGGAAG (9) 6.5 0.0065 P8 Cb GC CTCTCAGCTG (2) 4.9 0.0049 P8 Cb GC GCTAACCACC (3) 3.3 0.0033 P8 Cb GC GCTTTTAATG (4) 3.3 0.0033 P8 Cb GC TCCCCCTCAA (4) 3.3 0.0033 Cb medulloblastoma CTAAAAAAAA (20) 39.3 0.0393 Cb medulloblastoma GATGTGGCTG (10) 32.4 0.0324 Cb medulloblastoma AATGGCTAGC 16.2 0.0162 Cb medulloblastoma GCTAACCACC (3) 11.6 0.0116 Cb medulloblastoma GACTGGGAAG (9) 2.3 0.0023 P8 GC+1d culture GATGTGGCTG (10) 67.4 0.0674 P8 GC+1d culture CTAAAAAAAA (20) 19.4 0.0194 P8 GC+1d culture AATGGCTAGC 8 0.008 P8 GC+1d culture CTCTCAGCTG (2) 3.4 0.0034 P8 GC+1d culture GACTGGGAAG (9) 3.4 0.0034 P8 GC+1d culture GCTAACCACC (3) 2.3 0.0023 P8 GC+1d culture TCACCTCAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture GATGTGGCTG (10) 74.9 0.0749 P8 GC+SHH+1d culture CTAAAAAAAA (20) 41 0.041 P8 GC+SHH+1d culture AATGGCTAGC 17.6 0.0176 P8 GC+SHH+1d culture GCTAACCACC (3) 4.7 0.0047 P8 GC+SHH+1d culture GACTGGGAAG (9) 3.5 0.0035 P8 GC+SHH+1d culture CTCTCAGCTG (2) 2.3 0.0023 P8 GC+SHH+1d culture TCCCCCTCAA (4) 1.2 0.0012 3T3 fibroblasts GATGTGGCTG (10) 161.2 0.1612 3T3 fibroblasts AATGGCTAGC 10.5 0.0105 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GCTAACCACC (3) 7 0.007 3T3 fibroblasts CTCTCAGCTG (2) 3.5 0.0035 E15 cortex GATGTGGCTG (10) 108.9 0.1089 E15 cortex CTAAAAAAAA (20) 14.8 0.0148 E15 cortex GACTGGGAAG (9) 9.9 0.0099 E15 cortex AATGGCTAGC 4.9 0.0049 E15 cortex CTCTCAGCTG (2) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex GATGTGGCTG (10) 50 0.05 P1 cortex CTAAAAAAAA (20) 4.5 0.0045 P1 cortex GCTAACCACC (3) 4.5 0.0045 P1 cortex GCTTTTAATG (4) 4.5 0.0045 P1 cortex TAATTAAAGT (5) 4.5 0.0045 Hypothalamus GATGTGGCTG (10) 65.2 0.0652 Hypothalamus AATGGCTAGC 21.7 0.0217 Hypothalamus CTAAAAAAAA (20) 16.3 0.0163 Hypothalamus GCTAACCACC (3) 14.5 0.0145 Hypothalamus TCCCCCTCAA (4) 7.2 0.0072 Hypothalamus GACTGGGAAG (9) 1.8 0.0018 Hypothalamus TAATTAAAGT (5) 1.8 0.0018 E12.5 retina GATGTGGCTG (10) 167.1 0.1671 E12.5 retina TCCCCCTCAA (4) 62 0.062 E12.5 retina CTAAAAAAAA (20) 11.3 0.0113 E12.5 retina AATGGCTAGC 3.8 0.0038 E12.5 retina GACTGGGAAG (9) 1.9 0.0019 E12.5 retina GCTAACCACC (3) 1.9 0.0019 E12.5 retina TAATTAAAGT (5) 1.9 0.0019 E14.5 retina GATGTGGCTG (10) 120.3 0.1203 E14.5 retina TCCCCCTCAA (4) 82 0.082 E14.5 retina CTAAAAAAAA (20) 12.8 0.0128 E14.5 retina AATGGCTAGC 9.1 0.0091 E14.5 retina GCTAACCACC (3) 3.6 0.0036 E14.5 retina GACTGGGAAG (9) 1.8 0.0018 E14.5 retina TCCCTCAACT (5) 1.8 0.0018 E16.5 retina GATGTGGCTG (10) 134 0.134 E16.5 retina TCCCCCTCAA (4) 47.1 0.0471 E16.5 retina AATGGCTAGC 16.3 0.0163 E16.5 retina GCTAACCACC (3) 7.2 0.0072 E16.5 retina CTAAAAAAAA (20) 5.4 0.0054 E16.5 retina GACTGGGAAG (9) 3.6 0.0036 E16.5 retina CTCTCAGCTG (2) 1.8 0.0018 E16.5 retina GCTTTTAATG (4) 1.8 0.0018 E16.5 retina TCCCTCAACT (5) 1.8 0.0018 E18.5 retina GATGTGGCTG (10) 147.3 0.1473 E18.5 retina TCCCCCTCAA (4) 60 0.06 E18.5 retina CTAAAAAAAA (20) 20 0.02 E18.5 retina AATGGCTAGC 18.2 0.0182 E18.5 retina GCTAACCACC (3) 1.8 0.0018 E18.5 retina TCACCTCAAA (2) 1.8 0.0018 P0.5 retina GATGTGGCTG (10) 78.5 0.0785 P0.5 retina AATGGCTAGC 5.9 0.0059 P0.5 retina CTAAAAAAAA (20) 5.9 0.0059 P0.5 retina GACTGGGAAG (9) 5.9 0.0059 P0.5 retina GCTAACCACC (3) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina CCTGGCTGCT (5) 2 0.002 P0.5 retina TCACCTCAAA (2) 2 0.002 P2.5 retina GATGTGGCTG (10) 66.9 0.0669 P2.5 retina AATGGCTAGC 17.6 0.0176 P2.5 retina CTAAAAAAAA (20) 15.8 0.0158 P2.5 retina GACTGGGAAG (9) 7 0.007 P2.5 retina GCTAACCACC (3) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TCCCTCAACT (5) 1.8 0.0018 P4.5 retina GATGTGGCTG (10) 35.7 0.0357 P4.5 retina CTAAAAAAAA (20) 29.7 0.0297 P4.5 retina AATGGCTAGC 19.8 0.0198 P4.5 retina CTCTCAGCTG (2) 5.9 0.0059 P4.5 retina GACTGGGAAG (9) 2 0.002 P4.5 retina GCTAACCACC (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TAATTAAAGT (5) 2 0.002 P6.5 retina GATGTGGCTG (10) 36.7 0.0367 P6.5 retina AATGGCTAGC 18.3 0.0183 P6.5 retina CTAAAAAAAA (20) 13.3 0.0133 P6.5 retina CTCTCAGCTG (2) 8.3 0.0083 P6.5 retina GACTGGGAAG (9) 5 0.005 P6.5 retina GCTAACCACC (3) 5 0.005 P6.5 retina CCTGGCTGCT (5) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TAATTAAAGT (5) 1.7 0.0017 P6.5 retina TCACCTCAAA (2) 1.7 0.0017 P10.5 crx- retina GATGTGGCTG (10) 48.3 0.0483 P10.5 crx- retina AATGGCTAGC 18.6 0.0186 P10.5 crx- retina GCTAACCACC (3) 18.6 0.0186 P10.5 crx- retina TCCCCCTCAA (4) 11.1 0.0111 P10.5 crx- retina CTAAAAAAAA (20) 5.6 0.0056 P10.5 crx- retina CTCTCAGCTG (2) 3.7 0.0037 P10.5 crx- retina GACTGGGAAG (9) 3.7 0.0037 P10.5 crx+ retina GATGTGGCTG (10) 65.4 0.0654 P10.5 crx+ retina AATGGCTAGC 23.1 0.0231 P10.5 crx+ retina CTAAAAAAAA (20) 7.7 0.0077 P10.5 crx+ retina GCTAACCACC (3) 5.8 0.0058 P10.5 crx+ retina CTCTCAGCTG (2) 3.8 0.0038 P10.5 crx+ retina GACTGGGAAG (9) 3.8 0.0038 P10.5 crx+ retina CCTGGCTGCT (5) 1.9 0.0019 P10.5 crx+ retina TAATTAAAGT (5) 1.9 0.0019 P10.5 crx+ retina TCCCCCTCAA (4) 1.9 0.0019 Adult retinal GATGTGGCTG (10) 14.8 0.0148 Adult retinal GCTAACCACC (3) 9.3 0.0093 Adult retinal TCCCCCTCAA (4) 7.4 0.0074 Adult retinal AATGGCTAGC 5.6 0.0056 Adult retinal CCTGGCTGCT (5) 5.6 0.0056 Adult retinal CTAAAAAAAA (20) 5.6 0.0056 Adult retinal GACTGGGAAG (9) 3.7 0.0037 Adult retinal CTCTCAGCTG (2) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TCCCTCAACT (5) 1.9 0.0019 ONL GATGTGGCTG (10) 11.5 0.0115 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TAATTAAAGT (5) 3.8 0.0038 ONL AATGGCTAGC 1.9 0.0019 ONL CCTGGCTGCT (5) 1.9 0.0019 ONL CTAAAAAAAA (20) 1.9 0.0019 ONL CTCTCAGCTG (2) 1.9 0.0019 ONL GCTAACCACC (3) 1.9 0.0019