Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.35661	BC021381	cDNA sequence BC021381	13		212483
Human Homolog	FLJ10404[hypothetical protein FLJ10404]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGAGAGATA (2) 11.4 0.0114 P8 Cb GC AAGGGGGGCA (4) 4.9 0.0049 P8 Cb GC GTCCAAGAAG (3) 3.3 0.0033 P8 Cb GC AAAAAAAAGG (6) 1.6 0.0016 P8 Cb GC GCTGCCGTAG (3) 1.6 0.0016 Cb medulloblastoma GGGAGAGATA (2) 4.6 0.0046 Cb medulloblastoma AAGGGGGGCA (4) 2.3 0.0023 Cb medulloblastoma GACTCAGGGA (5) 2.3 0.0023 P8 GC+1d culture AAGGGGGGCA (4) 22.8 0.0228 P8 GC+1d culture GGGAGAGATA (2) 12.6 0.0126 P8 GC+1d culture GACTCAGGGA (5) 2.3 0.0023 P8 GC+1d culture AAAAAGAGAA (5) 1.1 0.0011 P8 GC+SHH+1d culture AAGGGGGGCA (4) 31.6 0.0316 P8 GC+SHH+1d culture GGGAGAGATA (2) 18.7 0.0187 P8 GC+SHH+1d culture GACTCAGGGA (5) 2.3 0.0023 P8 GC+SHH+1d culture AAAAAAAAGG (6) 1.2 0.0012 P8 GC+SHH+1d culture TGGGACACAG (6) 1.2 0.0012 3T3 fibroblasts AAGGGGGGCA (4) 56.1 0.0561 3T3 fibroblasts GACTCAGGGA (5) 10.5 0.0105 3T3 fibroblasts GCAGGGTAGG 3.5 0.0035 E15 cortex AAGGGGGGCA (4) 24.7 0.0247 E15 cortex GGGAGAGATA (2) 9.9 0.0099 E15 cortex GCTGCCGTAG (3) 4.9 0.0049 P1 cortex GGGAGAGATA (2) 13.6 0.0136 P1 cortex AAGGGGGGCA (4) 4.5 0.0045 P1 cortex CTGTGCTGGG (3) 4.5 0.0045 P1 cortex GCTGCCGTAG (3) 4.5 0.0045 Hypothalamus GGGAGAGATA (2) 14.5 0.0145 Hypothalamus AAGGGGGGCA (4) 3.6 0.0036 Hypothalamus AAAAAGAGAA (5) 1.8 0.0018 Hypothalamus CTGTGCTGGG (3) 1.8 0.0018 Hypothalamus GCGTCCATTC 1.8 0.0018 E12.5 retina GGGAGAGATA (2) 33.8 0.0338 E12.5 retina AAGGGGGGCA (4) 16.9 0.0169 E12.5 retina GACTCAGGGA (5) 7.5 0.0075 E12.5 retina AAAAAGAGAA (5) 3.8 0.0038 E14.5 retina GGGAGAGATA (2) 23.7 0.0237 E14.5 retina AAGGGGGGCA (4) 5.5 0.0055 E14.5 retina GACTCAGGGA (5) 3.6 0.0036 E14.5 retina GTCCAAGAAG (3) 1.8 0.0018 E16.5 retina GGGAGAGATA (2) 16.3 0.0163 E16.5 retina AAGGGGGGCA (4) 12.7 0.0127 E16.5 retina GACTCAGGGA (5) 1.8 0.0018 E16.5 retina GCGTCCATTC 1.8 0.0018 E16.5 retina GTCCAAGAAG (3) 1.8 0.0018 E16.5 retina TGGGACACAG (6) 1.8 0.0018 E18.5 retina GGGAGAGATA (2) 36.4 0.0364 E18.5 retina AAGGGGGGCA (4) 10.9 0.0109 E18.5 retina AAAAAAAAGG (6) 1.8 0.0018 E18.5 retina GACTCAGGGA (5) 1.8 0.0018 E18.5 retina GCAGGGTAGG 1.8 0.0018 E18.5 retina GCTGCCGTAG (3) 1.8 0.0018 E18.5 retina TGGGACACAG (6) 1.8 0.0018 P0.5 retina AAGGGGGGCA (4) 29.4 0.0294 P0.5 retina GGGAGAGATA (2) 21.6 0.0216 P0.5 retina GACTCAGGGA (5) 2 0.002 P0.5 retina GCAGGGTAGG 2 0.002 P2.5 retina GGGAGAGATA (2) 66.9 0.0669 P2.5 retina AAGGGGGGCA (4) 5.3 0.0053 P2.5 retina GACTCAGGGA (5) 3.5 0.0035 P4.5 retina GGGAGAGATA (2) 59.4 0.0594 P4.5 retina AAGGGGGGCA (4) 4 0.004 P4.5 retina GACTCAGGGA (5) 4 0.004 P4.5 retina GTCCAAGAAG (3) 2 0.002 P6.5 retina GGGAGAGATA (2) 46.7 0.0467 P6.5 retina AAGGGGGGCA (4) 15 0.015 P6.5 retina GACTCAGGGA (5) 6.7 0.0067 P6.5 retina AAAAAAAAGG (6) 1.7 0.0017 P6.5 retina AAAAAGAGAA (5) 1.7 0.0017 P10.5 crx- retina GGGAGAGATA (2) 29.7 0.0297 P10.5 crx- retina GACTCAGGGA (5) 3.7 0.0037 P10.5 crx- retina AAAAAGAGAA (5) 1.9 0.0019 P10.5 crx- retina GCGTCCATTC 1.9 0.0019 P10.5 crx- retina TGGGACACAG (6) 1.9 0.0019 P10.5 crx+ retina GGGAGAGATA (2) 25 0.025 P10.5 crx+ retina AAGGGGGGCA (4) 3.8 0.0038 P10.5 crx+ retina GACTCAGGGA (5) 3.8 0.0038 P10.5 crx+ retina CTGTGCTGGG (3) 1.9 0.0019 Adult retinal GGGAGAGATA (2) 14.8 0.0148 Adult retinal AAGGGGGGCA (4) 3.7 0.0037 Adult retinal CTGTGCTGGG (3) 1.9 0.0019 Adult retinal TGGGACACAG (6) 1.9 0.0019 ONL GGGAGAGATA (2) 13.4 0.0134 ONL GACTCAGGGA (5) 7.7 0.0077 ONL AAGGGGGGCA (4) 1.9 0.0019