Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3596	Cops2	COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	2	2 70.0 cM	12848
Gene Ontology	cell proliferation | negative regulation of transcription | nucleus | protein binding | receptor activity | signal transduction | signalosome complex | transcription corepressor activity | transcription from Pol II promoter
Human Homolog	TRIP15[thyroid receptor interacting protein 15]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTATTTGGT (4) 4.9 0.0049 P8 Cb GC ATTCCGAATT (107) 1.6 0.0016 P8 Cb GC GTCTTTCTAC (3) 1.6 0.0016 P8 Cb GC TATAAATGAA (2) 1.6 0.0016 Cb medulloblastoma GTCTTTCTAC (3) 9.2 0.0092 Cb medulloblastoma AATAAATGAA 2.3 0.0023 Cb medulloblastoma TAACTCTGGA (3) 2.3 0.0023 P8 GC+1d culture GTCTTTCTAC (3) 6.8 0.0068 P8 GC+1d culture TATAAATGAA (2) 3.4 0.0034 P8 GC+1d culture GGTGTCATCA (3) 1.1 0.0011 P8 GC+SHH+1d culture TATAAATGAA (2) 3.5 0.0035 P8 GC+SHH+1d culture GTCTTTCTAC (3) 2.3 0.0023 P8 GC+SHH+1d culture ATTTTAAAAA (7) 1.2 0.0012 3T3 fibroblasts TTGTACCTGC (2) 3.5 0.0035 E15 cortex TTGTACCTGC (2) 4.9 0.0049 P1 cortex AATAAATGAA 4.5 0.0045 P1 cortex GTCTTTCTAC (3) 4.5 0.0045 P1 cortex TATAAATGAA (2) 4.5 0.0045 Hypothalamus GTCTTTCTAC (3) 10.9 0.0109 Hypothalamus TAACTCTGGA (3) 1.8 0.0018 Hypothalamus TATAAATGAA (2) 1.8 0.0018 Hypothalamus TTGTACCTGC (2) 1.8 0.0018 E12.5 retina GTCTTTCTAC (3) 1.9 0.0019 E12.5 retina TAACTCTGGA (3) 1.9 0.0019 E12.5 retina TATAAATGAA (2) 1.9 0.0019 E14.5 retina GTCTTTCTAC (3) 5.5 0.0055 E14.5 retina CTTATTTGGT (4) 1.8 0.0018 E14.5 retina GAAGACAAAG (6) 1.8 0.0018 E14.5 retina TAACTCTGGA (3) 1.8 0.0018 E16.5 retina GAAGACAAAG (6) 3.6 0.0036 E16.5 retina GTCTTTCTAC (3) 3.6 0.0036 E16.5 retina TTGTACCTGC (2) 3.6 0.0036 E16.5 retina TATAAATGAA (2) 1.8 0.0018 E18.5 retina GTCTTTCTAC (3) 3.6 0.0036 E18.5 retina ATTTTAAAAA (7) 1.8 0.0018 E18.5 retina GGTGTCATCA (3) 1.8 0.0018 E18.5 retina TTGTACCTGC (2) 1.8 0.0018 P0.5 retina CTTATTTGGT (4) 3.9 0.0039 P2.5 retina GTCTTTCTAC (3) 7 0.007 P2.5 retina CTTATTTGGT (4) 1.8 0.0018 P2.5 retina TAACTCTGGA (3) 1.8 0.0018 P2.5 retina TATAAATGAA (2) 1.8 0.0018 P2.5 retina TTGTACCTGC (2) 1.8 0.0018 P4.5 retina GTCTTTCTAC (3) 7.9 0.0079 P4.5 retina ATTCCGAATT (107) 2 0.002 P4.5 retina CTTATTTGGT (4) 2 0.002 P4.5 retina TAACTCTGGA (3) 2 0.002 P6.5 retina ATTCCGAATT (107) 3.3 0.0033 P6.5 retina AATAAATGAA 1.7 0.0017 P6.5 retina CTTATTTGGT (4) 1.7 0.0017 P6.5 retina GGTGTCATCA (3) 1.7 0.0017 P6.5 retina GTCTTTCTAC (3) 1.7 0.0017 P10.5 crx- retina TATAAATGAA (2) 1.9 0.0019 P10.5 crx+ retina GTCTTTCTAC (3) 5.8 0.0058 P10.5 crx+ retina TATAAATGAA (2) 1.9 0.0019 Adult retinal TAACTCTGGA (3) 1.9 0.0019 ONL ATTCCGAATT (107) 3.8 0.0038 ONL GTCTTTCTAC (3) 1.9 0.0019 ONL TATAAATGAA (2) 1.9 0.0019