Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3619	Ctss	cathepsin S	3	3 42.7 cM	13040
Gene Ontology	cathepsin S activity | cathepsin S activity | cysteine-type endopeptidase activity | cysteine-type peptidase activity | extracellular space | hydrolase activity | lysosome | membrane | peptidase activity | proteolysis and peptidolysis
Human Homolog	CTSS[cathepsin S]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 23 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATAGCCCCAA 8.2 0.0082 P8 Cb GC GATGACCCAG (3) 1.6 0.0016 Cb medulloblastoma ATAGCCCCAA 6.9 0.0069 P8 GC+1d culture ATAGCCCCAA 4.6 0.0046 P8 GC+1d culture TCTGCTTCTT (7) 1.1 0.0011 P8 GC+SHH+1d culture ATAGCCCCAA 2.3 0.0023 P8 GC+SHH+1d culture TCTGCTTCTT (7) 2.3 0.0023 3T3 fibroblasts GATGACCCAG (3) 10.5 0.0105 E15 cortex GATGACCCAG (3) 9.9 0.0099 E15 cortex TCTGCTTCTT (7) 9.9 0.0099 P1 cortex TCTGCTTCTT (7) 4.5 0.0045 Hypothalamus ATAGCCCCAA 18.1 0.0181 E12.5 retina GATGACCCAG (3) 1.9 0.0019 E16.5 retina ATAGCCCCAA 1.8 0.0018 P0.5 retina GATGACCCAG (3) 3.9 0.0039 P2.5 retina ATAGCCCCAA 1.8 0.0018 P4.5 retina ATAGCCCCAA 5.9 0.0059 P6.5 retina ATAGCCCCAA 8.3 0.0083 P10.5 crx- retina ATAGCCCCAA 5.6 0.0056 P10.5 crx- retina GATGACCCAG (3) 3.7 0.0037 P10.5 crx- retina TCTGCTTCTT (7) 1.9 0.0019 P10.5 crx+ retina ATAGCCCCAA 5.8 0.0058 Adult retinal GATGACCCAG (3) 1.9 0.0019