Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3645	Myo5a	myosin Va	9	9 42.0 cM	17918
Gene Ontology	actin binding | actin binding | ATP binding | calmodulin binding | cytoskeleton organization and biogenesis | microfilament motor activity | motor activity | myosin | protein binding | vesicle transport along actin filament
Human Homolog	MYO5A[myosin VA (heavy polypeptide 12, myoxin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCTCTGGAG (6) 8.2 0.0082 P8 Cb GC ATAAACTTTT (3) 1.6 0.0016 P8 Cb GC TTGGTATTGT (3) 1.6 0.0016 P8 Cb GC TTTCCAAGGC (2) 1.6 0.0016 Cb medulloblastoma AGTTTTTCAC 4.6 0.0046 Cb medulloblastoma GCATTTAACA (2) 2.3 0.0023 Cb medulloblastoma TGCTCTGGAG (6) 2.3 0.0023 Cb medulloblastoma TTGGTATTGT (3) 2.3 0.0023 Cb medulloblastoma TTTCCAAGGC (2) 2.3 0.0023 P8 GC+1d culture TGCTCTGGAG (6) 5.7 0.0057 P8 GC+1d culture AGTTTTTCAC 2.3 0.0023 P8 GC+1d culture TTGGTATTGT (3) 2.3 0.0023 P8 GC+1d culture TGAGACATTT (6) 1.1 0.0011 P8 GC+1d culture TTGGGAGAGA (2) 1.1 0.0011 P8 GC+SHH+1d culture TGCTCTGGAG (6) 5.9 0.0059 P8 GC+SHH+1d culture TTGATATTGT 3.5 0.0035 P8 GC+SHH+1d culture TTGGTATTGT (3) 2.3 0.0023 P8 GC+SHH+1d culture AGTTTTTCAC 1.2 0.0012 P8 GC+SHH+1d culture ATAAACTTTT (3) 1.2 0.0012 P8 GC+SHH+1d culture TCAAACAGCT (2) 1.2 0.0012 P8 GC+SHH+1d culture TGAGACATTT (6) 1.2 0.0012 P8 GC+SHH+1d culture TGATGTGTGA (6) 1.2 0.0012 3T3 fibroblasts TGCTCTGGAG (6) 3.5 0.0035 3T3 fibroblasts TTGGTATTGT (3) 3.5 0.0035 E15 cortex TGCTCTGGAG (6) 4.9 0.0049 P1 cortex GAGAAACTGA (5) 31.8 0.0318 P1 cortex AGTTTTTCAC 9.1 0.0091 P1 cortex CATATATTCA (2) 9.1 0.0091 P1 cortex TGCTCTGGAG (6) 4.5 0.0045 P1 cortex TTGGGAGAGA (2) 4.5 0.0045 P1 cortex TTGGTATTGT (3) 4.5 0.0045 Hypothalamus TGCTCTGGAG (6) 7.2 0.0072 Hypothalamus TTGATATTGT 5.4 0.0054 Hypothalamus AGTTTTTCAC 1.8 0.0018 Hypothalamus GAGAAACTGA (5) 1.8 0.0018 Hypothalamus TGAGACATTT (6) 1.8 0.0018 Hypothalamus TTGGGAGAGA (2) 1.8 0.0018 Hypothalamus TTTCCAAGGC (2) 1.8 0.0018 E12.5 retina ATAAACTTTT (3) 5.6 0.0056 E12.5 retina GCATTTAACA (2) 1.9 0.0019 E12.5 retina TTGGGAGAGA (2) 1.9 0.0019 E12.5 retina TTGGTATTGT (3) 1.9 0.0019 E14.5 retina ATAAACTTTT (3) 1.8 0.0018 E14.5 retina TGATGTGTGA (6) 1.8 0.0018 E14.5 retina TTGGGAGAGA (2) 1.8 0.0018 E16.5 retina ATAAACTTTT (3) 1.8 0.0018 E16.5 retina CATATATTCA (2) 1.8 0.0018 E16.5 retina TGAGACATTT (6) 1.8 0.0018 E16.5 retina TTGATATTGT 1.8 0.0018 E16.5 retina TTGGTATTGT (3) 1.8 0.0018 E18.5 retina ATAAACTTTT (3) 5.5 0.0055 E18.5 retina TCAAACAGCT (2) 1.8 0.0018 E18.5 retina TTGATATTGT 1.8 0.0018 P0.5 retina TGCTCTGGAG (6) 2 0.002 P0.5 retina TTGGTATTGT (3) 2 0.002 P2.5 retina ATAAACTTTT (3) 5.3 0.0053 P2.5 retina AGTTTTTCAC 1.8 0.0018 P2.5 retina TGCTCTGGAG (6) 1.8 0.0018 P2.5 retina TTGATATTGT 1.8 0.0018 P4.5 retina ATAAACTTTT (3) 5.9 0.0059 P4.5 retina TTGATATTGT 4 0.004 P4.5 retina GCATTTAACA (2) 2 0.002 P4.5 retina TGCTCTGGAG (6) 2 0.002 P4.5 retina TTGGGAGAGA (2) 2 0.002 P6.5 retina TGCTCTGGAG (6) 5 0.005 P6.5 retina CATATATTCA (2) 3.3 0.0033 P6.5 retina TTGGGAGAGA (2) 3.3 0.0033 P6.5 retina ATAAACTTTT (3) 1.7 0.0017 P10.5 crx- retina AGTTTTTCAC 7.4 0.0074 P10.5 crx- retina ATAAACTTTT (3) 1.9 0.0019 P10.5 crx- retina TGATGTGTGA (6) 1.9 0.0019 P10.5 crx- retina TGCTCTGGAG (6) 1.9 0.0019 P10.5 crx+ retina TGCTCTGGAG (6) 13.5 0.0135 P10.5 crx+ retina TTGGTATTGT (3) 5.8 0.0058 P10.5 crx+ retina AGTTTTTCAC 3.8 0.0038 P10.5 crx+ retina ATAAACTTTT (3) 1.9 0.0019 Adult retinal AGTTTTTCAC 5.6 0.0056 Adult retinal TGCTCTGGAG (6) 5.6 0.0056 Adult retinal GAGAAACTGA (5) 3.7 0.0037 Adult retinal CATATATTCA (2) 1.9 0.0019 Adult retinal TTGATATTGT 1.9 0.0019 Adult retinal TTGGTATTGT (3) 1.9 0.0019 ONL AGTTTTTCAC 1.9 0.0019 ONL ATAAACTTTT (3) 1.9 0.0019 ONL TCAAACAGCT (2) 1.9 0.0019 ONL TGCTCTGGAG (6) 1.9 0.0019