Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3655	Rad54l	RAD54 like (S. cerevisiae)	4		19366
Gene Ontology	ATP binding | ATP dependent helicase activity | DNA binding | DNA repair | helicase activity | hydrolase activity | nucleic acid binding | nucleus
Human Homolog	RAD54L[RAD54-like (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCACCGCTAG (2) 6.5 0.0065 P8 Cb GC CCTTTATTCC (18) 3.3 0.0033 P8 Cb GC ATGAAGACTG 1.6 0.0016 Cb medulloblastoma AAAGGAAAAA (15) 6.9 0.0069 Cb medulloblastoma AATTCAAGAA (5) 2.3 0.0023 P8 GC+1d culture CCTTTATTCC (18) 6.8 0.0068 P8 GC+1d culture CCACCGCTAG (2) 2.3 0.0023 P8 GC+1d culture AAAGGGACTG (2) 1.1 0.0011 P8 GC+1d culture AATTCAAGAA (5) 1.1 0.0011 P8 GC+1d culture ACCCTCTGGA 1.1 0.0011 P8 GC+1d culture ATGTTTGCCC (2) 1.1 0.0011 P8 GC+SHH+1d culture CCACCGCTAG (2) 7 0.007 P8 GC+SHH+1d culture AAAGGGAAAA (10) 2.3 0.0023 P8 GC+SHH+1d culture AAAGGAAAAA (15) 1.2 0.0012 P8 GC+SHH+1d culture ACCCTCTGGA 1.2 0.0012 P8 GC+SHH+1d culture ATGTTTGCCC (2) 1.2 0.0012 P8 GC+SHH+1d culture CCTTTATTCC (18) 1.2 0.0012 3T3 fibroblasts CCACCGCTAG (2) 14 0.014 E15 cortex AAAGGAAAAA (15) 4.9 0.0049 P1 cortex CCTTTATTCC (18) 27.3 0.0273 P1 cortex ATGAAGACTG 4.5 0.0045 P1 cortex CCACCGCTAG (2) 4.5 0.0045 Hypothalamus AAAGGAAAAA (15) 1.8 0.0018 Hypothalamus GCTGATGAGA (2) 1.8 0.0018 E12.5 retina CCACCGCTAG (2) 5.6 0.0056 E12.5 retina CCTTTATTCC (18) 5.6 0.0056 E12.5 retina AAAGGGAAAA (10) 1.9 0.0019 E14.5 retina CCTTTATTCC (18) 12.8 0.0128 E14.5 retina CCACCGCTAG (2) 9.1 0.0091 E14.5 retina ACCCTCTGGA 1.8 0.0018 E16.5 retina CCACCGCTAG (2) 9.1 0.0091 E16.5 retina CCTTTATTCC (18) 3.6 0.0036 E16.5 retina AAAGGAAAAA (15) 1.8 0.0018 E16.5 retina ACCCTCTGGA 1.8 0.0018 E18.5 retina CCTTTATTCC (18) 7.3 0.0073 E18.5 retina CCACCGCTAG (2) 5.5 0.0055 E18.5 retina AAAGGAAAAA (15) 3.6 0.0036 E18.5 retina AAAGGGAAAA (10) 1.8 0.0018 E18.5 retina ACCCTCTGGA 1.8 0.0018 P0.5 retina CCACCGCTAG (2) 9.8 0.0098 P0.5 retina AAAGGGAAAA (10) 2 0.002 P0.5 retina AATTCAAGAA (5) 2 0.002 P0.5 retina ACCCTCTGGA 2 0.002 P0.5 retina CCTTTATTCC (18) 2 0.002 P2.5 retina CCACCGCTAG (2) 5.3 0.0053 P2.5 retina CCTTTATTCC (18) 3.5 0.0035 P2.5 retina AAAGGGACTG (2) 1.8 0.0018 P2.5 retina AATTCAAGAA (5) 1.8 0.0018 P2.5 retina ATGTTTGCCC (2) 1.8 0.0018 P4.5 retina CCTTTATTCC (18) 7.9 0.0079 P4.5 retina AAAGGAAAAA (15) 4 0.004 P4.5 retina CCACCGCTAG (2) 2 0.002 P6.5 retina CCTTTATTCC (18) 5 0.005 P6.5 retina AAAGGGAAAA (10) 1.7 0.0017 P10.5 crx- retina CCACCGCTAG (2) 3.7 0.0037 P10.5 crx- retina CCTTTATTCC (18) 3.7 0.0037 P10.5 crx- retina AAAGGGACTG (2) 1.9 0.0019 P10.5 crx+ retina CCTTTATTCC (18) 7.7 0.0077 P10.5 crx+ retina AAAGGAAAAA (15) 1.9 0.0019 P10.5 crx+ retina ATGAAGACTG 1.9 0.0019 Adult retinal ACCCTCTGGA 3.7 0.0037 Adult retinal CCACCGCTAG (2) 1.9 0.0019 Adult retinal CCTTTATTCC (18) 1.9 0.0019 ONL CCTTTATTCC (18) 1.9 0.0019