Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.36718
Nubp2
nucleotide binding protein 2
17
17 10.0 cM
26426
Gene Ontology
ATP binding
Human Homolog
NUBP2[nucleotide binding protein 2 (MinD homolog, E. coli)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCTGGAACAA
(
2
)
1.6
0.0016
Cb medulloblastoma
TCTGGAACAA
(
2
)
11.6
0.0116
P8 GC+1d culture
TCTGGAACAA
(
2
)
8
0.008
P8 GC+1d culture
CACTGATTAA (
2
)
1.1
0.0011
P8 GC+1d culture
TTCTTTCTCT (
2
)
1.1
0.0011
P8 GC+1d culture
TTTGGAACAA (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TCTGGAACAA
(
2
)
4.7
0.0047
P8 GC+SHH+1d culture
TTCTTTCTCT (
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TTTGGAACAA (
4
)
2.3
0.0023
3T3 fibroblasts
TCTGGAACAA
(
2
)
3.5
0.0035
E15 cortex
TCTGGAACAA
(
2
)
4.9
0.0049
E15 cortex
TGTGTGGGCT
(
3
)
4.9
0.0049
E12.5 retina
TCTGGAACAA
(
2
)
7.5
0.0075
E14.5 retina
TCTGGAACAA
(
2
)
10.9
0.0109
E16.5 retina
TCTGGAACAA
(
2
)
12.7
0.0127
E18.5 retina
TCTGGAACAA
(
2
)
14.6
0.0146
E18.5 retina
TTTGGAACAA (
4
)
1.8
0.0018
P0.5 retina
GGCCACTATG (
2
)
3.9
0.0039
P0.5 retina
TCTGGAACAA
(
2
)
3.9
0.0039
P2.5 retina
TCTGGAACAA
(
2
)
12.3
0.0123
P4.5 retina
TCTGGAACAA
(
2
)
9.9
0.0099
P4.5 retina
TTTGGAACAA (
4
)
5.9
0.0059
P4.5 retina
GGCCACTATG (
2
)
2
0.002
P6.5 retina
TCTGGAACAA
(
2
)
8.3
0.0083
P6.5 retina
TTCTTTCTCT (
2
)
1.7
0.0017
P6.5 retina
TTTGGAACAA (
4
)
1.7
0.0017
P10.5 crx- retina
TCTGGAACAA
(
2
)
7.4
0.0074
P10.5 crx- retina
CACTGATTAA (
2
)
5.6
0.0056
P10.5 crx- retina
TCCTTGGCTG
(
3
)
1.9
0.0019
P10.5 crx- retina
TTTGGAACAA (
4
)
1.9
0.0019
P10.5 crx+ retina
TCTGGAACAA
(
2
)
5.8
0.0058
P10.5 crx+ retina
TTTGGAACAA (
4
)
3.8
0.0038
Adult retinal
TCTGGAACAA
(
2
)
7.4
0.0074
Adult retinal
CACTGATTAA (
2
)
1.9
0.0019
Adult retinal
GGCCACTATG (
2
)
1.9
0.0019
ONL
TTCTTTCTCT (
2
)
7.7
0.0077
ONL
TCCTTGGCTG
(
3
)
3.8
0.0038
ONL
TGTGTGGGCT
(
3
)
3.8
0.0038
ONL
CACTGATTAA (
2
)
1.9
0.0019
ONL
TCTGGAACAA
(
2
)
1.9
0.0019
