Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.36834	C77823	expressed sequence C77823	2		96963
Mm.36834	A230056K03Rik	RIKEN cDNA A230056K03 gene	2		320809
Mm.36834	Camsap1	calmodulin regulated spectrin-associated protein 1	2		227634
Human Homolog	CAMSAP1[calmodulin regulated spectrin-associated protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 111 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCGGCGCA (6) 3.3 0.0033 P8 Cb GC ATATTATTTG (6) 1.6 0.0016 P8 Cb GC CCCAGCATCC (6) 1.6 0.0016 P8 Cb GC GATGCTGTGG (7) 1.6 0.0016 P8 Cb GC GTGGTGCATA (8) 1.6 0.0016 P8 Cb GC TTGGCCAGCT (3) 1.6 0.0016 Cb medulloblastoma GGACAGCTCT (4) 18.5 0.0185 Cb medulloblastoma CAGCTCATTC (6) 2.3 0.0023 Cb medulloblastoma GATGCTGTGG (7) 2.3 0.0023 Cb medulloblastoma GCCAAGAGGC (9) 2.3 0.0023 Cb medulloblastoma TGGTAAAGAA (4) 2.3 0.0023 Cb medulloblastoma TTGGCCAGCT (3) 2.3 0.0023 P8 GC+1d culture ATATTATTTG (6) 6.8 0.0068 P8 GC+1d culture GGACAGAACG (4) 5.7 0.0057 P8 GC+1d culture CCCAGCATCC (6) 2.3 0.0023 P8 GC+1d culture GCCAAGAGGC (9) 2.3 0.0023 P8 GC+1d culture GTGGTGCATA (8) 2.3 0.0023 P8 GC+1d culture TTGGCCAGCT (3) 2.3 0.0023 P8 GC+SHH+1d culture TTGGCCAGCT (3) 7 0.007 P8 GC+SHH+1d culture GGACAGAACG (4) 4.7 0.0047 P8 GC+SHH+1d culture GTGGTGCATA (8) 4.7 0.0047 P8 GC+SHH+1d culture GCCAAGAGGC (9) 3.5 0.0035 P8 GC+SHH+1d culture ACACTGCTAG (3) 1.2 0.0012 P8 GC+SHH+1d culture ATATTATTTG (6) 1.2 0.0012 P8 GC+SHH+1d culture CCCAGCATCC (6) 1.2 0.0012 P8 GC+SHH+1d culture TTCACATTTA (9) 1.2 0.0012 3T3 fibroblasts GCCAAGAGGC (9) 17.5 0.0175 3T3 fibroblasts GTGGTGCATA (8) 14 0.014 3T3 fibroblasts AAGCGGCGCA (6) 7 0.007 3T3 fibroblasts TTGGCCAGCT (3) 7 0.007 3T3 fibroblasts GATGCTGTGG (7) 3.5 0.0035 3T3 fibroblasts GGACAGAACG (4) 3.5 0.0035 3T3 fibroblasts TGCACAGGGG (4) 3.5 0.0035 E15 cortex GATGCTGTGG (7) 4.9 0.0049 E15 cortex TTGGCCAGCT (3) 4.9 0.0049 P1 cortex GGACAGAACG (4) 4.5 0.0045 P1 cortex GTGGTGCATA (8) 4.5 0.0045 P1 cortex TTCACATTTA (9) 4.5 0.0045 Hypothalamus TGGTAAAGAA (4) 3.6 0.0036 Hypothalamus ACACTGCTAG (3) 1.8 0.0018 Hypothalamus CAGCTCATTC (6) 1.8 0.0018 Hypothalamus GATGCTGTGG (7) 1.8 0.0018 Hypothalamus GCCAAGAGGC (9) 1.8 0.0018 Hypothalamus GGACAGAACG (4) 1.8 0.0018 Hypothalamus GGACAGCTCT (4) 1.8 0.0018 E12.5 retina GATGCTGTGG (7) 9.4 0.0094 E12.5 retina GGACAGCTCT (4) 9.4 0.0094 E12.5 retina GTGGTGCATA (8) 5.6 0.0056 E12.5 retina GCCAAGAGGC (9) 3.8 0.0038 E14.5 retina TGCACAGGGG (4) 5.5 0.0055 E14.5 retina GTGGTGCATA (8) 3.6 0.0036 E14.5 retina CAGCTCATTC (6) 1.8 0.0018 E14.5 retina GATGCTGTGG (7) 1.8 0.0018 E14.5 retina GGACAGCTCT (4) 1.8 0.0018 E14.5 retina TTCACATTTA (9) 1.8 0.0018 E16.5 retina TTGGCCAGCT (3) 9.1 0.0091 E16.5 retina GTGGTGCATA (8) 3.6 0.0036 E16.5 retina TGCACAGGGG (4) 3.6 0.0036 E16.5 retina CCCAGCATCC (6) 1.8 0.0018 E16.5 retina GGACAGAACG (4) 1.8 0.0018 E18.5 retina GCCAAGAGGC (9) 3.6 0.0036 E18.5 retina GTGGTGCATA (8) 3.6 0.0036 E18.5 retina TGGTAAAGAA (4) 1.8 0.0018 E18.5 retina TTGGCCAGCT (3) 1.8 0.0018 P0.5 retina GCCAAGAGGC (9) 5.9 0.0059 P0.5 retina GATGCTGTGG (7) 3.9 0.0039 P0.5 retina TGCACAGGGG (4) 3.9 0.0039 P0.5 retina GGACAGAACG (4) 2 0.002 P0.5 retina GTGGTGCATA (8) 2 0.002 P0.5 retina TTGGCCAGCT (3) 2 0.002 P2.5 retina GTGGTGCATA (8) 7 0.007 P2.5 retina GGACAGAACG (4) 3.5 0.0035 P2.5 retina TTGGCCAGCT (3) 3.5 0.0035 P2.5 retina ACACTGCTAG (3) 1.8 0.0018 P2.5 retina ATATTATTTG (6) 1.8 0.0018 P2.5 retina CCCAGCATCC (6) 1.8 0.0018 P4.5 retina TTGGCCAGCT (3) 5.9 0.0059 P4.5 retina CCCAGCATCC (6) 2 0.002 P4.5 retina GTGGTGCATA (8) 2 0.002 P6.5 retina GGACAGCTCT (4) 3.3 0.0033 P6.5 retina GTGGTGCATA (8) 3.3 0.0033 P6.5 retina ATATTATTTG (6) 1.7 0.0017 P6.5 retina CCCAGCATCC (6) 1.7 0.0017 P6.5 retina GCCAAGAGGC (9) 1.7 0.0017 P6.5 retina GGACAGAACG (4) 1.7 0.0017 P6.5 retina TGCACAGGGG (4) 1.7 0.0017 P10.5 crx- retina AAGCGGCGCA (6) 3.7 0.0037 P10.5 crx- retina CCCAGCATCC (6) 3.7 0.0037 P10.5 crx- retina GGACAGCTCT (4) 3.7 0.0037 P10.5 crx- retina ACACTGCTAG (3) 1.9 0.0019 P10.5 crx- retina GCCAAGAGGC (9) 1.9 0.0019 P10.5 crx- retina GTGGTGCATA (8) 1.9 0.0019 P10.5 crx- retina TTGGCCAGCT (3) 1.9 0.0019 P10.5 crx+ retina GGACAGAACG (4) 3.8 0.0038 P10.5 crx+ retina GTGGTGCATA (8) 3.8 0.0038 P10.5 crx+ retina ATATTATTTG (6) 1.9 0.0019 P10.5 crx+ retina CCCAGCATCC (6) 1.9 0.0019 P10.5 crx+ retina GATGCTGTGG (7) 1.9 0.0019 P10.5 crx+ retina TGGTAAAGAA (4) 1.9 0.0019 P10.5 crx+ retina TTGGCCAGCT (3) 1.9 0.0019 Adult retinal TTGGCCAGCT (3) 13 0.013 Adult retinal GTGGTGCATA (8) 7.4 0.0074 Adult retinal CCCAGCATCC (6) 3.7 0.0037 Adult retinal GGACAGAACG (4) 3.7 0.0037 Adult retinal CAGCTCATTC (6) 1.9 0.0019 Adult retinal GGACAGCTCT (4) 1.9 0.0019 ONL TTGGCCAGCT (3) 9.6 0.0096 ONL GGACAGAACG (4) 5.7 0.0057 ONL CAGCTCATTC (6) 1.9 0.0019 ONL GTGGTGCATA (8) 1.9 0.0019 ONL TGCACAGGGG (4) 1.9 0.0019