Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3746	D12Mgi41	DNA Segment, Chr 12, Mouse Genome Informatics 41	12		404597
Mm.3746	Naca	nascent polypeptide-associated complex alpha polypeptide	10		17938
Gene Ontology	cytoplasm | nucleus | TATA-binding protein binding | transcription coactivator activity
Human Homolog	NACA[nascent-polypeptide-associated complex alpha polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCGCAAGCAA (3) 32.6 0.0326 P8 Cb GC TCGCAGCAAA (2) 4.9 0.0049 P8 Cb GC TACTTTTGGC (3) 1.6 0.0016 P8 Cb GC TGGGAAAGGA (5) 1.6 0.0016 P8 Cb GC TTACAGGGGT (3) 1.6 0.0016 Cb medulloblastoma TCGCAAGCAA (3) 23.1 0.0231 Cb medulloblastoma TACTTTTGGC (3) 4.6 0.0046 Cb medulloblastoma ACCAGTTCTA (4) 2.3 0.0023 Cb medulloblastoma GCAATTAACA (5) 2.3 0.0023 Cb medulloblastoma TCGCAGCAAA (2) 2.3 0.0023 Cb medulloblastoma TGCAAACAGA (15) 2.3 0.0023 P8 GC+1d culture TCGCAAGCAA (3) 49.1 0.0491 P8 GC+1d culture TACTTTTGGC (3) 5.7 0.0057 P8 GC+1d culture TCGCAGCAAA (2) 3.4 0.0034 P8 GC+SHH+1d culture TCGCAAGCAA (3) 45.7 0.0457 P8 GC+SHH+1d culture TCGCAGCAAA (2) 4.7 0.0047 P8 GC+SHH+1d culture ACCAGTTCTA (4) 1.2 0.0012 P8 GC+SHH+1d culture TACTTTTGGC (3) 1.2 0.0012 P8 GC+SHH+1d culture TGCAAACAGA (15) 1.2 0.0012 3T3 fibroblasts TCGCAAGCAA (3) 63.1 0.0631 3T3 fibroblasts ACCAGTTCTA (4) 3.5 0.0035 3T3 fibroblasts TACTTTTGGC (3) 3.5 0.0035 E15 cortex TCGCAAGCAA (3) 64.3 0.0643 E15 cortex GCAATTAACA (5) 4.9 0.0049 P1 cortex TCGCAAGCAA (3) 13.6 0.0136 Hypothalamus TCGCAAGCAA (3) 21.7 0.0217 Hypothalamus ACCAGTTCTA (4) 3.6 0.0036 E12.5 retina TCGCAAGCAA (3) 60.1 0.0601 E12.5 retina TACTTTTGGC (3) 3.8 0.0038 E12.5 retina ACCAGTTCTA (4) 1.9 0.0019 E12.5 retina GCAATTAACA (5) 1.9 0.0019 E12.5 retina TTACAGGGGT (3) 1.9 0.0019 E14.5 retina TCGCAAGCAA (3) 25.5 0.0255 E14.5 retina ACCAGTTCTA (4) 5.5 0.0055 E14.5 retina TGCAAACAGA (15) 3.6 0.0036 E14.5 retina TGGGAAAGGA (5) 1.8 0.0018 E14.5 retina TTACAGGGGT (3) 1.8 0.0018 E16.5 retina TCGCAAGCAA (3) 56.1 0.0561 E16.5 retina ACCAGTTCTA (4) 7.2 0.0072 E16.5 retina TACTTTTGGC (3) 1.8 0.0018 E16.5 retina TCGCAGCAAA (2) 1.8 0.0018 E16.5 retina TGGGAAAGGA (5) 1.8 0.0018 E18.5 retina TCGCAAGCAA (3) 25.5 0.0255 P0.5 retina TCGCAAGCAA (3) 72.6 0.0726 P0.5 retina ACCAGTTCTA (4) 2 0.002 P2.5 retina TCGCAAGCAA (3) 35.2 0.0352 P2.5 retina ATGAAAATGG (8) 1.8 0.0018 P2.5 retina TCGCAGCAAA (2) 1.8 0.0018 P2.5 retina TTACAGGGGT (3) 1.8 0.0018 P4.5 retina TCGCAAGCAA (3) 11.9 0.0119 P4.5 retina ACCAGTTCTA (4) 4 0.004 P4.5 retina TTACAGGGGT (3) 4 0.004 P4.5 retina TCGCAGCAAA (2) 2 0.002 P6.5 retina TCGCAAGCAA (3) 26.7 0.0267 P6.5 retina TTACAGGGGT (3) 3.3 0.0033 P6.5 retina TGCAAACAGA (15) 1.7 0.0017 P10.5 crx- retina TCGCAAGCAA (3) 70.6 0.0706 P10.5 crx- retina TGCAAACAGA (15) 3.7 0.0037 P10.5 crx- retina ATGAAAATGG (8) 1.9 0.0019 P10.5 crx- retina TTACAGGGGT (3) 1.9 0.0019 P10.5 crx+ retina TCGCAAGCAA (3) 28.8 0.0288 P10.5 crx+ retina ACCAGTTCTA (4) 3.8 0.0038 P10.5 crx+ retina TCGCAGCAAA (2) 1.9 0.0019 Adult retinal TCGCAAGCAA (3) 18.5 0.0185 Adult retinal ATGAAAATGG (8) 1.9 0.0019 Adult retinal TTACAGGGGT (3) 1.9 0.0019 ONL TCGCAAGCAA (3) 11.5 0.0115 ONL ACCAGTTCTA (4) 1.9 0.0019 ONL TTACAGGGGT (3) 1.9 0.0019