Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3757	Prpf8	pre-mRNA processing factor 8	11	11 45.0 cM	192159
Gene Ontology	nuclear mRNA splicing, via spliceosome | protein binding | snRNP U5
Human Homolog	PRPF8[PRP8 pre-mRNA processing factor 8 homolog (yeast)] | PRPF8[PRP8 pre-mRNA processing factor 8 homolog (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGCTCACCA (5) 4.9 0.0049 P8 Cb GC ATGGCAAGCT (3) 3.3 0.0033 P8 Cb GC AAGCCAACCC (2) 1.6 0.0016 P8 Cb GC AGGTCCACAG (2) 1.6 0.0016 P8 Cb GC GGATCGAGGC (2) 1.6 0.0016 Cb medulloblastoma AGGTCCACAG (2) 6.9 0.0069 Cb medulloblastoma ATGGCAAGCT (3) 2.3 0.0023 Cb medulloblastoma GGGCTCACCA (5) 2.3 0.0023 P8 GC+1d culture AGGTCCACAG (2) 6.8 0.0068 P8 GC+1d culture GGGCTCACCA (5) 2.3 0.0023 P8 GC+1d culture AAGCCAACCC (2) 1.1 0.0011 P8 GC+1d culture AGTCACAGCC (2) 1.1 0.0011 P8 GC+1d culture ATGGCAAGCT (3) 1.1 0.0011 P8 GC+1d culture GTGAAAACCA (4) 1.1 0.0011 P8 GC+SHH+1d culture AGGTCCACAG (2) 9.4 0.0094 P8 GC+SHH+1d culture ATGGCAAGCT (3) 5.9 0.0059 P8 GC+SHH+1d culture AAGCCAACCC (2) 1.2 0.0012 P8 GC+SHH+1d culture AAGGTCACAG (6) 1.2 0.0012 P8 GC+SHH+1d culture GTGAAAACCA (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTGGCTTTT (5) 1.2 0.0012 3T3 fibroblasts AAGGTCACAG (6) 7 0.007 3T3 fibroblasts AGGTCCACAG (2) 7 0.007 3T3 fibroblasts GGGCTCACCA (5) 7 0.007 3T3 fibroblasts AAGCCAACCC (2) 3.5 0.0035 3T3 fibroblasts ATGGCAAGCT (3) 3.5 0.0035 E15 cortex AGGTCCACAG (2) 4.9 0.0049 P1 cortex AGGTCCACAG (2) 13.6 0.0136 P1 cortex GGGCTCACCA (5) 4.5 0.0045 P1 cortex TGTGGCTTTT (5) 4.5 0.0045 Hypothalamus AAGGTCACAG (6) 3.6 0.0036 Hypothalamus AGGTCCACAG (2) 1.8 0.0018 Hypothalamus AGTCACAGCC (2) 1.8 0.0018 Hypothalamus GTGAAAACCA (4) 1.8 0.0018 Hypothalamus TGTGGCTTTT (5) 1.8 0.0018 E12.5 retina AGGTCCACAG (2) 5.6 0.0056 E12.5 retina GGGCTCACCA (5) 5.6 0.0056 E12.5 retina AAGGTCACAG (6) 1.9 0.0019 E14.5 retina AGGTCCACAG (2) 9.1 0.0091 E14.5 retina ATGGCAAGCT (3) 3.6 0.0036 E14.5 retina GGGCTCACCA (5) 1.8 0.0018 E14.5 retina GTGAAAACCA (4) 1.8 0.0018 E16.5 retina AGGTCCACAG (2) 3.6 0.0036 E16.5 retina AGTCACAGCC (2) 3.6 0.0036 E16.5 retina AAATACGAGC 1.8 0.0018 E16.5 retina AAGGTCACAG (6) 1.8 0.0018 E16.5 retina GTGAAAACCA (4) 1.8 0.0018 E18.5 retina TGCACCACTG (8) 5.5 0.0055 E18.5 retina AGGTCCACAG (2) 3.6 0.0036 E18.5 retina GGGCTCACCA (5) 1.8 0.0018 P0.5 retina AGGTCCACAG (2) 15.7 0.0157 P0.5 retina ATGGCAAGCT (3) 5.9 0.0059 P0.5 retina GGGCTCACCA (5) 5.9 0.0059 P0.5 retina GTGAAAACCA (4) 2 0.002 P2.5 retina AAGGTCACAG (6) 1.8 0.0018 P2.5 retina GGGCTCACCA (5) 1.8 0.0018 P4.5 retina AGGTCCACAG (2) 5.9 0.0059 P4.5 retina GGGCTCACCA (5) 4 0.004 P4.5 retina ATGGCAAGCT (3) 2 0.002 P4.5 retina GGATCGAGGC (2) 2 0.002 P4.5 retina GTGAAAACCA (4) 2 0.002 P6.5 retina AGGTCCACAG (2) 5 0.005 P6.5 retina GGGCTCACCA (5) 3.3 0.0033 P6.5 retina AAGCCAACCC (2) 1.7 0.0017 P6.5 retina ATGGCAAGCT (3) 1.7 0.0017 P10.5 crx- retina AGGTCCACAG (2) 5.6 0.0056 P10.5 crx- retina GGGCTCACCA (5) 5.6 0.0056 P10.5 crx- retina AAATACGAGC 3.7 0.0037 P10.5 crx- retina ATGGCAAGCT (3) 1.9 0.0019 P10.5 crx- retina TGTGGCTTTT (5) 1.9 0.0019 P10.5 crx+ retina AGGTCCACAG (2) 7.7 0.0077 P10.5 crx+ retina AAGGTCACAG (6) 1.9 0.0019 P10.5 crx+ retina TGCACCACTG (8) 1.9 0.0019 Adult retinal AGGTCCACAG (2) 5.6 0.0056 Adult retinal GCCAAATTAA 3.7 0.0037 Adult retinal AAGGTCACAG (6) 1.9 0.0019 Adult retinal GGGCTCACCA (5) 1.9 0.0019 Adult retinal GTGAAAACCA (4) 1.9 0.0019 ONL AGGTCCACAG (2) 15.3 0.0153 ONL GCCAAATTAA 1.9 0.0019 ONL GGGCTCACCA (5) 1.9 0.0019 ONL GTGAAAACCA (4) 1.9 0.0019