Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.37801
Shcbp1
Shc SH2-domain binding protein 1
8
20419
Gene Ontology
protein binding
|
SH2-domain binding
Human Homolog
SHCBP1[SHC SH2-domain binding protein 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGGAAGTG (
6
)
8.2
0.0082
P8 Cb GC
AAGCAAATGA (
7
)
4.9
0.0049
P8 Cb GC
GCTGTGTATT
(
4
)
4.9
0.0049
Cb medulloblastoma
TGTGGAAGTG (
6
)
4.6
0.0046
Cb medulloblastoma
AAAAACTCAA (
3
)
2.3
0.0023
P8 GC+1d culture
TGTGGAAGTG (
6
)
5.7
0.0057
P8 GC+1d culture
AAGCAAATGA (
7
)
2.3
0.0023
P8 GC+1d culture
GCTGTGTATT
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GCTGTGTATT
(
4
)
7
0.007
P8 GC+SHH+1d culture
AAAAACTCAA (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GCTCTGCAAG (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
TGTGGAAGTG (
6
)
1.2
0.0012
3T3 fibroblasts
GCTGTGTATT
(
4
)
3.5
0.0035
E15 cortex
GCTGTGTATT
(
4
)
4.9
0.0049
Hypothalamus
TGTGGAAGTG (
6
)
5.4
0.0054
Hypothalamus
AAGCAAATGA (
7
)
1.8
0.0018
Hypothalamus
GCTCTGCAAG (
6
)
1.8
0.0018
E12.5 retina
GCTGTGTATT
(
4
)
3.8
0.0038
E12.5 retina
TGTGGAAGTG (
6
)
1.9
0.0019
E14.5 retina
GCTGTGTATT
(
4
)
9.1
0.0091
E16.5 retina
GCTGTGTATT
(
4
)
5.4
0.0054
E16.5 retina
GCTCTGCAAG (
6
)
3.6
0.0036
E16.5 retina
TGTGGAAGTG (
6
)
3.6
0.0036
E16.5 retina
AAGCAAATGA (
7
)
1.8
0.0018
E16.5 retina
TTGGTTTCCT (
4
)
1.8
0.0018
E18.5 retina
GCTGTGTATT
(
4
)
7.3
0.0073
E18.5 retina
AAAAACTCAA (
3
)
1.8
0.0018
E18.5 retina
TGTGGAAGTG (
6
)
1.8
0.0018
P0.5 retina
TGTGGAAGTG (
6
)
11.8
0.0118
P0.5 retina
AAGCAAATGA (
7
)
3.9
0.0039
P0.5 retina
GCTCTGCAAG (
6
)
2
0.002
P0.5 retina
GCTGTGTATT
(
4
)
2
0.002
P2.5 retina
GCTGTGTATT
(
4
)
7
0.007
P2.5 retina
TGTGGAAGTG (
6
)
7
0.007
P2.5 retina
TTGGTTTCCT (
4
)
1.8
0.0018
P4.5 retina
TGTGGAAGTG (
6
)
4
0.004
P4.5 retina
GCTGTGTATT
(
4
)
2
0.002
P6.5 retina
TGTGGAAGTG (
6
)
8.3
0.0083
P6.5 retina
TTGGTTTCCT (
4
)
6.7
0.0067
P6.5 retina
AAAAACTCAA (
3
)
1.7
0.0017
P10.5 crx- retina
TTGGTTTCCT (
4
)
16.7
0.0167
P10.5 crx- retina
TGTGGAAGTG (
6
)
9.3
0.0093
P10.5 crx+ retina
AAAAACTCAA (
3
)
3.8
0.0038
P10.5 crx+ retina
TTGGTTTCCT (
4
)
3.8
0.0038
P10.5 crx+ retina
TGTGGAAGTG (
6
)
1.9
0.0019
Adult retinal
TTGGTTTCCT (
4
)
9.3
0.0093
Adult retinal
AAGCAAATGA (
7
)
5.6
0.0056
Adult retinal
TGTGGAAGTG (
6
)
5.6
0.0056
Adult retinal
GCTCTGCAAG (
6
)
3.7
0.0037
ONL
TTGGTTTCCT (
4
)
5.7
0.0057
ONL
AAGCAAATGA (
7
)
1.9
0.0019
