Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.38165	Slc27a1	solute carrier family 27 (fatty acid transporter), member 1	8		26457
Gene Ontology	catalytic activity | extracellular space | lipid transport | metabolism | transport | transporter activity
Human Homolog	SLC27A1[solute carrier family 27 (fatty acid transporter), member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGCCACCACC (12) 6.5 0.0065 P8 Cb GC TCAGCTGGGA (5) 3.3 0.0033 P8 Cb GC AGAGTGTTAC 1.6 0.0016 P8 Cb GC CGCCACCACA (11) 1.6 0.0016 P8 Cb GC TAACAGCTGC (2) 1.6 0.0016 P8 Cb GC TTGGCTGCTG (4) 1.6 0.0016 Cb medulloblastoma CGCCACCACA (11) 6.9 0.0069 Cb medulloblastoma CGCCACCACC (12) 6.9 0.0069 Cb medulloblastoma TAACAGCTGC (2) 6.9 0.0069 Cb medulloblastoma AGAGTGTTAC 2.3 0.0023 Cb medulloblastoma TCAGCTGGGA (5) 2.3 0.0023 Cb medulloblastoma TGTTTGTGGG (4) 2.3 0.0023 Cb medulloblastoma TTGGCTGCTG (4) 2.3 0.0023 P8 GC+1d culture TCAGCTGGGA (5) 4.6 0.0046 P8 GC+1d culture CGCCACCACA (11) 2.3 0.0023 P8 GC+1d culture CGCCACCACC (12) 2.3 0.0023 P8 GC+1d culture TCTTTAATCC (30) 2.3 0.0023 P8 GC+1d culture TGTTTGTGGG (4) 2.3 0.0023 P8 GC+1d culture TAACAGCTGC (2) 1.1 0.0011 P8 GC+1d culture TTGGCTGCTG (4) 1.1 0.0011 P8 GC+SHH+1d culture AGAGTGTTAC 5.9 0.0059 P8 GC+SHH+1d culture CGCCACCACC (12) 5.9 0.0059 P8 GC+SHH+1d culture TCTTTAATCC (30) 4.7 0.0047 P8 GC+SHH+1d culture CGCCACCACA (11) 2.3 0.0023 3T3 fibroblasts CGCCACCACA (11) 10.5 0.0105 3T3 fibroblasts CGCCACCACC (12) 7 0.007 3T3 fibroblasts TCTTTAATCC (30) 7 0.007 3T3 fibroblasts TTGGCTGCTG (4) 3.5 0.0035 E15 cortex CGCCACCACC (12) 14.8 0.0148 E15 cortex CGCCACCACA (11) 4.9 0.0049 E15 cortex TCTTTAATCC (30) 4.9 0.0049 P1 cortex TCTTTAATCC (30) 9.1 0.0091 P1 cortex CGCCACCACA (11) 4.5 0.0045 P1 cortex CGCCACCACC (12) 4.5 0.0045 Hypothalamus CGCCACCACC (12) 3.6 0.0036 Hypothalamus TCAGCTGGGA (5) 3.6 0.0036 Hypothalamus TTGGCTGCTG (4) 3.6 0.0036 Hypothalamus AGAGTGTTAC 1.8 0.0018 E12.5 retina CGCCACCACC (12) 1.9 0.0019 E12.5 retina TCAGCTGGGA (5) 1.9 0.0019 E14.5 retina TCTTTAATCC (30) 21.9 0.0219 E14.5 retina CGCCACCACA (11) 3.6 0.0036 E14.5 retina CGCCACCACC (12) 3.6 0.0036 E14.5 retina TGTTTGTGGG (4) 1.8 0.0018 E16.5 retina TCTTTAATCC (30) 9.1 0.0091 E16.5 retina CGCCACCACC (12) 3.6 0.0036 E16.5 retina CGCCACCACA (11) 1.8 0.0018 E16.5 retina TCAGCTGGGA (5) 1.8 0.0018 E16.5 retina TGTTTGTGGG (4) 1.8 0.0018 E16.5 retina TTGGCTGCTG (4) 1.8 0.0018 E18.5 retina CGCCACCACC (12) 10.9 0.0109 E18.5 retina TGTTTGTGGG (4) 5.5 0.0055 E18.5 retina AGAGTGTTAC 3.6 0.0036 E18.5 retina CGCCACCACA (11) 3.6 0.0036 E18.5 retina TCTTTAATCC (30) 1.8 0.0018 P0.5 retina CGCCACCACA (11) 7.9 0.0079 P0.5 retina CGCCACCACC (12) 5.9 0.0059 P0.5 retina TCAGCTGGGA (5) 2 0.002 P0.5 retina TCTTTAATCC (30) 2 0.002 P2.5 retina CGCCACCACA (11) 12.3 0.0123 P2.5 retina CGCCACCACC (12) 10.6 0.0106 P2.5 retina TCAGCTGGGA (5) 10.6 0.0106 P2.5 retina TCTTTAATCC (30) 1.8 0.0018 P4.5 retina TCTTTAATCC (30) 9.9 0.0099 P4.5 retina CGCCACCACC (12) 7.9 0.0079 P4.5 retina TCAGCTGGGA (5) 5.9 0.0059 P4.5 retina AGAGTGTTAC 4 0.004 P4.5 retina CGCCACCACA (11) 4 0.004 P4.5 retina TGTTTGTGGG (4) 2 0.002 P6.5 retina CGCCACCACA (11) 8.3 0.0083 P6.5 retina CGCCACCACC (12) 8.3 0.0083 P6.5 retina TCAGCTGGGA (5) 6.7 0.0067 P6.5 retina AGAGTGTTAC 3.3 0.0033 P6.5 retina TGTTTGTGGG (4) 1.7 0.0017 P10.5 crx- retina TCAGCTGGGA (5) 5.6 0.0056 P10.5 crx- retina AGAGTGTTAC 3.7 0.0037 P10.5 crx- retina CGCCACCACC (12) 1.9 0.0019 P10.5 crx- retina TCTTTAATCC (30) 1.9 0.0019 P10.5 crx+ retina TCAGCTGGGA (5) 3.8 0.0038 P10.5 crx+ retina TCTTTAATCC (30) 1.9 0.0019 Adult retinal CGCCACCACC (12) 9.3 0.0093 Adult retinal TCTTTAATCC (30) 7.4 0.0074 Adult retinal CGCCACCACA (11) 5.6 0.0056 Adult retinal TCAGCTGGGA (5) 3.7 0.0037 Adult retinal TAACAGCTGC (2) 1.9 0.0019 Adult retinal TGTTTGTGGG (4) 1.9 0.0019 ONL TCTTTAATCC (30) 13.4 0.0134 ONL CGCCACCACA (11) 1.9 0.0019 ONL CGCCACCACC (12) 1.9 0.0019 ONL TAACAGCTGC (2) 1.9 0.0019 ONL TCAGCTGGGA (5) 1.9 0.0019