Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.38166
2610203C20Rik
RIKEN cDNA 2610203C20 gene
9
70455
Mm.38166
D3Mgi9
DNA Segment, Chr 3, Mouse Genome Informatics 9
3
99733
Mm.38166
D230004N17Rik
RIKEN cDNA D230004N17 gene
9
320833
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 77 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTTTTTTCC (
11
)
11.4
0.0114
P8 Cb GC
GCTTTGACTG
(
3
)
1.6
0.0016
P8 Cb GC
TATGTGTGCA (
7
)
1.6
0.0016
P8 Cb GC
TTTACAGCTG (
6
)
1.6
0.0016
Cb medulloblastoma
TTTTTTTTCC (
11
)
4.6
0.0046
Cb medulloblastoma
GCTTTGACTG
(
3
)
2.3
0.0023
Cb medulloblastoma
GTGGCTGCCA (
6
)
2.3
0.0023
Cb medulloblastoma
TATGTGTGCA (
7
)
2.3
0.0023
Cb medulloblastoma
TTTACAGCTG (
6
)
2.3
0.0023
P8 GC+1d culture
TTTACAGCTG (
6
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTCC (
11
)
2.3
0.0023
P8 GC+1d culture
GTGGCTGCCA (
6
)
1.1
0.0011
P8 GC+1d culture
TGCCAAGCTC (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTTTTTTCC (
11
)
5.9
0.0059
P8 GC+SHH+1d culture
TGCCAAGCTC (
6
)
4.7
0.0047
P8 GC+SHH+1d culture
TTTACAGCTG (
6
)
1.2
0.0012
3T3 fibroblasts
GCTTTGACTG
(
3
)
7
0.007
3T3 fibroblasts
TTTACAGCTG (
6
)
3.5
0.0035
3T3 fibroblasts
TTTTTTTTCC (
11
)
3.5
0.0035
E15 cortex
GCTTTGACTG
(
3
)
9.9
0.0099
E15 cortex
GTGGCTGCCA (
6
)
4.9
0.0049
E15 cortex
TGCCAAGCTC (
6
)
4.9
0.0049
E15 cortex
TTTACAGCTG (
6
)
4.9
0.0049
P1 cortex
GCTTTGACTG
(
3
)
13.6
0.0136
P1 cortex
TATGTGTGCA (
7
)
4.5
0.0045
Hypothalamus
TTTTTTTTCC (
11
)
12.7
0.0127
Hypothalamus
TTTACAGCTG (
6
)
5.4
0.0054
Hypothalamus
GCTTTGACTG
(
3
)
3.6
0.0036
Hypothalamus
TATGTGTGCA (
7
)
3.6
0.0036
E12.5 retina
TATGTGTGCA (
7
)
3.8
0.0038
E12.5 retina
TGCCAAGCTC (
6
)
1.9
0.0019
E12.5 retina
TTTTTTTTCC (
11
)
1.9
0.0019
E14.5 retina
TTTTTTTTCC (
11
)
18.2
0.0182
E14.5 retina
TTTACAGCTG (
6
)
9.1
0.0091
E14.5 retina
GCTTTGACTG
(
3
)
1.8
0.0018
E14.5 retina
TATGTGTGCA (
7
)
1.8
0.0018
E14.5 retina
TGCCAAGCTC (
6
)
1.8
0.0018
E16.5 retina
TTTTTTTTCC (
11
)
36.2
0.0362
E16.5 retina
TTTACAGCTG (
6
)
5.4
0.0054
E16.5 retina
GTGGCTGCCA (
6
)
1.8
0.0018
E16.5 retina
TATGTGTGCA (
7
)
1.8
0.0018
E16.5 retina
TGCCAAGCTC (
6
)
1.8
0.0018
E18.5 retina
TTTTTTTTCC (
11
)
21.8
0.0218
E18.5 retina
TATGTGTGCA (
7
)
1.8
0.0018
E18.5 retina
TTTACAGCTG (
6
)
1.8
0.0018
P0.5 retina
TATGTGTGCA (
7
)
3.9
0.0039
P0.5 retina
TGCCAAGCTC (
6
)
3.9
0.0039
P0.5 retina
TTTTTTTTCC (
11
)
3.9
0.0039
P0.5 retina
TTTACAGCTG (
6
)
2
0.002
P2.5 retina
TTTTTTTTCC (
11
)
5.3
0.0053
P2.5 retina
TATGTGTGCA (
7
)
3.5
0.0035
P2.5 retina
TTTACAGCTG (
6
)
3.5
0.0035
P2.5 retina
GTGGCTGCCA (
6
)
1.8
0.0018
P2.5 retina
TGCCAAGCTC (
6
)
1.8
0.0018
P4.5 retina
TTTTTTTTCC (
11
)
9.9
0.0099
P4.5 retina
TTTACAGCTG (
6
)
5.9
0.0059
P4.5 retina
TATGTGTGCA (
7
)
2
0.002
P4.5 retina
TGCCAAGCTC (
6
)
2
0.002
P6.5 retina
TGCCAAGCTC (
6
)
6.7
0.0067
P6.5 retina
TTTACAGCTG (
6
)
5
0.005
P6.5 retina
TTTTTTTTCC (
11
)
3.3
0.0033
P6.5 retina
GCTTTGACTG
(
3
)
1.7
0.0017
P10.5 crx- retina
GCTTTGACTG
(
3
)
1.9
0.0019
P10.5 crx- retina
GTGGCTGCCA (
6
)
1.9
0.0019
P10.5 crx- retina
TATGTGTGCA (
7
)
1.9
0.0019
P10.5 crx- retina
TTTACAGCTG (
6
)
1.9
0.0019
P10.5 crx+ retina
TTTACAGCTG (
6
)
3.8
0.0038
P10.5 crx+ retina
TTTTTTTTCC (
11
)
3.8
0.0038
P10.5 crx+ retina
TATGTGTGCA (
7
)
1.9
0.0019
P10.5 crx+ retina
TGCCAAGCTC (
6
)
1.9
0.0019
Adult retinal
TTTACAGCTG (
6
)
3.7
0.0037
Adult retinal
GTGGCTGCCA (
6
)
1.9
0.0019
Adult retinal
TATGTGTGCA (
7
)
1.9
0.0019
Adult retinal
TTTTTTTTCC (
11
)
1.9
0.0019
ONL
TTTACAGCTG (
6
)
11.5
0.0115
ONL
TGCCAAGCTC (
6
)
1.9
0.0019
ONL
TTTTTTTTCC (
11
)
1.9
0.0019
