Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.38173
6030457N17Rik
RIKEN cDNA 6030457N17 gene
7
68079
Human Homolog
MGC13096[hypothetical protein MGC13096]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAATGATTCT (
5
)
13.1
0.0131
P8 Cb GC
GAAGAATTCT
(
3
)
4.9
0.0049
Cb medulloblastoma
TAATGATTCT (
5
)
6.9
0.0069
Cb medulloblastoma
GAAGAATTCT
(
3
)
4.6
0.0046
P8 GC+1d culture
GAAGAATTCT
(
3
)
2.3
0.0023
P8 GC+1d culture
TAATGATTCT (
5
)
2.3
0.0023
P8 GC+1d culture
CGCACAGCCT
(
2
)
1.1
0.0011
P8 GC+1d culture
GAAAAAAAAT (
10
)
1.1
0.0011
P8 GC+1d culture
GAGCAGTGCT (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GAAGAATTCT
(
3
)
10.5
0.0105
P8 GC+SHH+1d culture
TAATGATTCT (
5
)
3.5
0.0035
P8 GC+SHH+1d culture
GGGGGAAAAA (
20
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGACCAGTG
(
2
)
1.2
0.0012
E15 cortex
GGGGGAAAAA (
20
)
9.9
0.0099
E15 cortex
GAGCAGTGCT (
3
)
4.9
0.0049
P1 cortex
GAAGAATTCT
(
3
)
13.6
0.0136
P1 cortex
GGGGGAAAAA (
20
)
4.5
0.0045
Hypothalamus
TAATGATTCT (
5
)
5.4
0.0054
Hypothalamus
CTGACCAGTG
(
2
)
3.6
0.0036
Hypothalamus
GAAGAATTCT
(
3
)
1.8
0.0018
Hypothalamus
GGGGGAAAAA (
20
)
1.8
0.0018
E12.5 retina
TAATGATTCT (
5
)
7.5
0.0075
E12.5 retina
GAAGAATTCT
(
3
)
1.9
0.0019
E14.5 retina
TAATGATTCT (
5
)
10.9
0.0109
E14.5 retina
GAAAAAAAAT (
10
)
3.6
0.0036
E14.5 retina
CGCACAGCCT
(
2
)
1.8
0.0018
E14.5 retina
GAAGAATTCT
(
3
)
1.8
0.0018
E16.5 retina
GAAGAATTCT
(
3
)
9.1
0.0091
E16.5 retina
TAATGATTCT (
5
)
9.1
0.0091
E16.5 retina
CTGACCAGTG
(
2
)
1.8
0.0018
E18.5 retina
GAAGAATTCT
(
3
)
5.5
0.0055
E18.5 retina
TAATGATTCT (
5
)
5.5
0.0055
E18.5 retina
GAGCAGTGCT (
3
)
1.8
0.0018
E18.5 retina
GGGGGAAAAA (
20
)
1.8
0.0018
P0.5 retina
TAATGATTCT (
5
)
5.9
0.0059
P0.5 retina
GAAGAATTCT
(
3
)
2
0.002
P2.5 retina
GAAGAATTCT
(
3
)
8.8
0.0088
P2.5 retina
TAATGATTCT (
5
)
5.3
0.0053
P2.5 retina
CTGACCAGTG
(
2
)
1.8
0.0018
P2.5 retina
GGGGGAAAAA (
20
)
1.8
0.0018
P4.5 retina
GAAGAATTCT
(
3
)
7.9
0.0079
P4.5 retina
TAATGATTCT (
5
)
2
0.002
P6.5 retina
GAAAAAAAAT (
10
)
1.7
0.0017
P6.5 retina
TAATGATTCT (
5
)
1.7
0.0017
P10.5 crx- retina
TAATGATTCT (
5
)
11.1
0.0111
P10.5 crx- retina
GAAGAATTCT
(
3
)
3.7
0.0037
P10.5 crx+ retina
GAAGAATTCT
(
3
)
7.7
0.0077
P10.5 crx+ retina
TAATGATTCT (
5
)
3.8
0.0038
P10.5 crx+ retina
CGCACAGCCT
(
2
)
1.9
0.0019
Adult retinal
GAGCAGTGCT (
3
)
1.9
0.0019
ONL
TAATGATTCT (
5
)
5.7
0.0057
ONL
GAAGAATTCT
(
3
)
3.8
0.0038
