Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.38527	AW049492	expressed sequence AW049492	7		101817
Mm.38527	Egfl4	EGF-like-domain, multiple 4	7		269878
Gene Ontology	development | integral to membrane | structural molecule activity
Human Homolog	EGFL4[EGF-like-domain, multiple 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 87 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCCAGCCAG (9) 112.6 0.1126 P8 Cb GC CACACACACA (106) 11.4 0.0114 P8 Cb GC GGTCACATCT (4) 4.9 0.0049 P8 Cb GC CCCCAGCCTG (5) 1.6 0.0016 P8 Cb GC GAGGAGGTGG (13) 1.6 0.0016 P8 Cb GC TGCTGCTGTC (4) 1.6 0.0016 Cb medulloblastoma CCCCAGCCAG (9) 78.6 0.0786 Cb medulloblastoma CACACACACA (106) 32.4 0.0324 Cb medulloblastoma GCTCTGTGTC (4) 11.6 0.0116 Cb medulloblastoma GGTCACATCT (4) 4.6 0.0046 P8 GC+1d culture CCCCAGCCAG (9) 151.8 0.1518 P8 GC+1d culture GGTCACATCT (4) 11.4 0.0114 P8 GC+1d culture CACACACACA (106) 6.8 0.0068 P8 GC+1d culture CCCCAGCCTG (5) 4.6 0.0046 P8 GC+1d culture TGCTGCTGTC (4) 1.1 0.0011 P8 GC+SHH+1d culture CCCCAGCCAG (9) 139.3 0.1393 P8 GC+SHH+1d culture CACACACACA (106) 9.4 0.0094 P8 GC+SHH+1d culture GGTCACATCT (4) 9.4 0.0094 P8 GC+SHH+1d culture GCTCTGTGTC (4) 2.3 0.0023 P8 GC+SHH+1d culture TGCTGCTGTC (4) 1.2 0.0012 3T3 fibroblasts CCCCAGCCAG (9) 308.4 0.3084 3T3 fibroblasts CACACACACA (106) 17.5 0.0175 3T3 fibroblasts TGCTGCTGTC (4) 3.5 0.0035 E15 cortex CCCCAGCCAG (9) 188 0.188 E15 cortex GGTCACATCT (4) 19.8 0.0198 E15 cortex CACACACACA (106) 4.9 0.0049 E15 cortex CCCCAGCCTG (5) 4.9 0.0049 P1 cortex CCCCAGCCAG (9) 72.7 0.0727 P1 cortex CACACACACA (106) 27.3 0.0273 P1 cortex GCTCTGTGTC (4) 22.7 0.0227 Hypothalamus CACACACACA (106) 96 0.096 Hypothalamus CCCCAGCCAG (9) 74.3 0.0743 Hypothalamus GGTCACATCT (4) 9.1 0.0091 Hypothalamus GCTCTGTGTC (4) 3.6 0.0036 Hypothalamus GAGGAGGTGG (13) 1.8 0.0018 E12.5 retina CCCCAGCCAG (9) 255.3 0.2553 E12.5 retina CACACACACA (106) 3.8 0.0038 E12.5 retina GGTCACATCT (4) 3.8 0.0038 E12.5 retina TGCTGCTGTC (4) 1.9 0.0019 E14.5 retina CCCCAGCCAG (9) 235 0.235 E14.5 retina CACACACACA (106) 18.2 0.0182 E14.5 retina GGTCACATCT (4) 3.6 0.0036 E14.5 retina GAGGAGGTGG (13) 1.8 0.0018 E14.5 retina TGCTGCTGTC (4) 1.8 0.0018 E16.5 retina CCCCAGCCAG (9) 268.1 0.2681 E16.5 retina CACACACACA (106) 12.7 0.0127 E16.5 retina GGTCACATCT (4) 7.2 0.0072 E16.5 retina GCTCTGTGTC (4) 3.6 0.0036 E16.5 retina GAGGAGGTGG (13) 1.8 0.0018 E18.5 retina CCCCAGCCAG (9) 174.6 0.1746 E18.5 retina CACACACACA (106) 5.5 0.0055 E18.5 retina GGTCACATCT (4) 5.5 0.0055 E18.5 retina GCTCTGTGTC (4) 1.8 0.0018 P0.5 retina CCCCAGCCAG (9) 176.6 0.1766 P0.5 retina CACACACACA (106) 7.9 0.0079 P0.5 retina GGTCACATCT (4) 7.9 0.0079 P0.5 retina CCCCAGCCTG (5) 3.9 0.0039 P0.5 retina GCTCTGTGTC (4) 2 0.002 P2.5 retina CCCCAGCCAG (9) 126.7 0.1267 P2.5 retina CACACACACA (106) 21.1 0.0211 P2.5 retina GGTCACATCT (4) 5.3 0.0053 P2.5 retina GCTCTGTGTC (4) 3.5 0.0035 P4.5 retina CCCCAGCCAG (9) 144.6 0.1446 P4.5 retina CACACACACA (106) 7.9 0.0079 P4.5 retina GGTCACATCT (4) 7.9 0.0079 P4.5 retina GCTCTGTGTC (4) 2 0.002 P4.5 retina TGCTGCTGTC (4) 2 0.002 P6.5 retina CCCCAGCCAG (9) 106.7 0.1067 P6.5 retina CACACACACA (106) 8.3 0.0083 P6.5 retina GGTCACATCT (4) 6.7 0.0067 P10.5 crx- retina CCCCAGCCAG (9) 87.3 0.0873 P10.5 crx- retina GGTCACATCT (4) 14.9 0.0149 P10.5 crx- retina CACACACACA (106) 5.6 0.0056 P10.5 crx- retina GCTCTGTGTC (4) 3.7 0.0037 P10.5 crx+ retina CCCCAGCCAG (9) 82.7 0.0827 P10.5 crx+ retina CACACACACA (106) 7.7 0.0077 P10.5 crx+ retina GCTCTGTGTC (4) 5.8 0.0058 P10.5 crx+ retina GGTCACATCT (4) 3.8 0.0038 P10.5 crx+ retina TGCTGCTGTC (4) 1.9 0.0019 Adult retinal CCCCAGCCAG (9) 74.1 0.0741 Adult retinal CACACACACA (106) 16.7 0.0167 Adult retinal GGTCACATCT (4) 9.3 0.0093 Adult retinal GCTCTGTGTC (4) 7.4 0.0074 Adult retinal GAGGAGGTGG (13) 1.9 0.0019 ONL CCCCAGCCAG (9) 30.6 0.0306 ONL CACACACACA (106) 21.1 0.0211 ONL GGTCACATCT (4) 3.8 0.0038