Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.38927	Ppil4	peptidylprolyl isomerase (cyclophilin)-like 4	10		67418
Gene Ontology	isomerase activity | peptidyl-prolyl cis-trans isomerase activity | protein folding
Human Homolog	PPIL4[peptidylprolyl isomerase (cyclophilin)-like 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGCTCACA (25) 11.4 0.0114 Cb medulloblastoma ATGGCTCACA (25) 20.8 0.0208 Cb medulloblastoma GTCTAGAAGA 2.3 0.0023 Cb medulloblastoma TATGCACAAC (3) 2.3 0.0023 P8 GC+1d culture ATGGCTCACA (25) 33.1 0.0331 P8 GC+1d culture TATGCACAAC (3) 1.1 0.0011 P8 GC+SHH+1d culture ATGGCTCACA (25) 25.8 0.0258 P8 GC+SHH+1d culture GTCTAGAAGA 1.2 0.0012 P8 GC+SHH+1d culture TATGCACAAC (3) 1.2 0.0012 3T3 fibroblasts ATGGCTCACA (25) 31.5 0.0315 3T3 fibroblasts GAGCTGAAGC (6) 3.5 0.0035 E15 cortex ATGGCTCACA (25) 29.7 0.0297 E15 cortex GAGCTGAAGC (6) 9.9 0.0099 P1 cortex ATGGCTCACA (25) 13.6 0.0136 Hypothalamus ATGGCTCACA (25) 43.5 0.0435 E12.5 retina ATGGCTCACA (25) 48.8 0.0488 E12.5 retina GTCTAGAAGA 1.9 0.0019 E12.5 retina TTGTACTTCA (3) 1.9 0.0019 E14.5 retina ATGGCTCACA (25) 47.4 0.0474 E16.5 retina ATGGCTCACA (25) 58 0.058 E18.5 retina ATGGCTCACA (25) 38.2 0.0382 E18.5 retina TTGCAAATGC (5) 1.8 0.0018 P0.5 retina ATGGCTCACA (25) 35.3 0.0353 P0.5 retina GAGCTGAAGC (6) 2 0.002 P0.5 retina GTCTAGAAGA 2 0.002 P2.5 retina ATGGCTCACA (25) 31.7 0.0317 P4.5 retina ATGGCTCACA (25) 23.8 0.0238 P4.5 retina TTGCAAATGC (5) 2 0.002 P6.5 retina ATGGCTCACA (25) 55 0.055 P6.5 retina TTGCAAATGC (5) 3.3 0.0033 P6.5 retina GTCTAGAAGA 1.7 0.0017 P10.5 crx- retina ATGGCTCACA (25) 44.6 0.0446 P10.5 crx- retina GTCTAGAAGA 1.9 0.0019 P10.5 crx+ retina ATGGCTCACA (25) 44.2 0.0442 P10.5 crx+ retina TATGCACAAC (3) 1.9 0.0019 Adult retinal ATGGCTCACA (25) 33.3 0.0333 Adult retinal TTGCAAATGC (5) 1.9 0.0019 ONL ATGGCTCACA (25) 49.8 0.0498 ONL TTGTACTTCA (3) 7.7 0.0077 ONL GTCTAGAAGA 1.9 0.0019