Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.39101
AI746471
expressed sequence AI746471
4
100195
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTCCCTTTT (
3
)
24.5
0.0245
P8 Cb GC
GAATCATTTG
(
5
)
1.6
0.0016
P8 Cb GC
TGTATGAATG (
2
)
1.6
0.0016
Cb medulloblastoma
CCTCCCTTTT (
3
)
16.2
0.0162
Cb medulloblastoma
GAATCATTTG
(
5
)
6.9
0.0069
P8 GC+1d culture
CCTCCCTTTT (
3
)
13.7
0.0137
P8 GC+1d culture
TGTATGAATG (
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CCTCCCTTTT (
3
)
19.9
0.0199
P8 GC+SHH+1d culture
GAAAATGGAA (
9
)
1.2
0.0012
3T3 fibroblasts
CCTCCCTTTT (
3
)
10.5
0.0105
E15 cortex
CCTCCCTTTT (
3
)
14.8
0.0148
E15 cortex
GAAAATGGAA (
9
)
4.9
0.0049
P1 cortex
CCTCCCTTTT (
3
)
27.3
0.0273
Hypothalamus
CCTCCCTTTT (
3
)
14.5
0.0145
Hypothalamus
CTGTTAACCT (
2
)
1.8
0.0018
E12.5 retina
CCTCCCTTTT (
3
)
37.5
0.0375
E12.5 retina
CTGTTAACCT (
2
)
3.8
0.0038
E12.5 retina
CAAAGAGAAA (
3
)
1.9
0.0019
E14.5 retina
CCTCCCTTTT (
3
)
31
0.031
E14.5 retina
CTGTTAACCT (
2
)
1.8
0.0018
E16.5 retina
CCTCCCTTTT (
3
)
27.2
0.0272
E16.5 retina
CTGTTAACCT (
2
)
5.4
0.0054
E18.5 retina
CCTCCCTTTT (
3
)
21.8
0.0218
E18.5 retina
CTGTTAACCT (
2
)
12.7
0.0127
P0.5 retina
CCTCCCTTTT (
3
)
9.8
0.0098
P0.5 retina
CTGTTAACCT (
2
)
5.9
0.0059
P0.5 retina
CAAAGAGAAA (
3
)
2
0.002
P2.5 retina
CTGTTAACCT (
2
)
17.6
0.0176
P2.5 retina
CCTCCCTTTT (
3
)
14.1
0.0141
P4.5 retina
CTGTTAACCT (
2
)
51.5
0.0515
P4.5 retina
CCTCCCTTTT (
3
)
9.9
0.0099
P6.5 retina
CTGTTAACCT (
2
)
93.4
0.0934
P6.5 retina
CCTCCCTTTT (
3
)
18.3
0.0183
P6.5 retina
GAAAATGGAA (
9
)
1.7
0.0017
P10.5 crx- retina
CTGTTAACCT (
2
)
65
0.065
P10.5 crx- retina
CCTCCCTTTT (
3
)
9.3
0.0093
P10.5 crx- retina
GAATCATTTG
(
5
)
1.9
0.0019
P10.5 crx+ retina
CTGTTAACCT (
2
)
96.1
0.0961
P10.5 crx+ retina
CCTCCCTTTT (
3
)
19.2
0.0192
Adult retinal
CTGTTAACCT (
2
)
46.3
0.0463
Adult retinal
CCTCCCTTTT (
3
)
3.7
0.0037
ONL
CTGTTAACCT (
2
)
93.9
0.0939
ONL
CCTCCCTTTT (
3
)
7.7
0.0077
ONL
CAAAGAGAAA (
3
)
5.7
0.0057
ONL
TGTATGAATG (
2
)
1.9
0.0019
