Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3914	Slc12a1	solute carrier family 12, member 1	2	2 69.5 cM	20495
Gene Ontology	amino acid transport | amino acid-polyamine transporter activity | carrier activity | cation:chloride symporter activity | chloride transport | integral to membrane | integral to plasma membrane | ion transport | membrane | potassium ion transport | sodium ion transport | symporter activity | transport | transporter activity
Human Homolog	SLC12A1[solute carrier family 12 (sodium/potassium/chloride transporters), member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAGAAAA (6) 14.7 0.0147 P8 Cb GC GCCCTGGTGC (4) 9.8 0.0098 P8 Cb GC TGTATCTTTT (9) 1.6 0.0016 Cb medulloblastoma TAAAAGAAAA (6) 64.7 0.0647 Cb medulloblastoma GCCCTGGTGC (4) 53.2 0.0532 P8 GC+1d culture GCCCTGGTGC (4) 46.8 0.0468 P8 GC+1d culture TAAAAGAAAA (6) 24 0.024 P8 GC+1d culture GCAGTGCGGG (4) 1.1 0.0011 P8 GC+SHH+1d culture GCCCTGGTGC (4) 45.7 0.0457 P8 GC+SHH+1d culture TAAAAGAAAA (6) 34 0.034 P8 GC+SHH+1d culture GCAGTGCGGG (4) 3.5 0.0035 P8 GC+SHH+1d culture GTGGGATCCG 2.3 0.0023 P8 GC+SHH+1d culture TGTATCTTTT (9) 2.3 0.0023 3T3 fibroblasts GCCCTGGTGC (4) 3.5 0.0035 E15 cortex GCCCTGGTGC (4) 19.8 0.0198 E15 cortex TAAAAGAAAA (6) 9.9 0.0099 P1 cortex TAAAAGAAAA (6) 13.6 0.0136 Hypothalamus GCCCTGGTGC (4) 19.9 0.0199 Hypothalamus TAAAAGAAAA (6) 12.7 0.0127 Hypothalamus GCAGTGCGGG (4) 1.8 0.0018 Hypothalamus TGTATCTTTT (9) 1.8 0.0018 E12.5 retina TAAAAGAAAA (6) 15 0.015 E12.5 retina GCCCTGGTGC (4) 13.1 0.0131 E12.5 retina TGTATCTTTT (9) 3.8 0.0038 E14.5 retina TAAAAGAAAA (6) 21.9 0.0219 E14.5 retina GCCCTGGTGC (4) 12.8 0.0128 E14.5 retina GCAGTGCGGG (4) 3.6 0.0036 E14.5 retina TGTATCTTTT (9) 3.6 0.0036 E16.5 retina TAAAAGAAAA (6) 21.7 0.0217 E16.5 retina GCCCTGGTGC (4) 18.1 0.0181 E16.5 retina GCAGTGCGGG (4) 5.4 0.0054 E18.5 retina GCCCTGGTGC (4) 21.8 0.0218 E18.5 retina TAAAAGAAAA (6) 20 0.02 P0.5 retina GCCCTGGTGC (4) 37.3 0.0373 P0.5 retina TAAAAGAAAA (6) 7.9 0.0079 P2.5 retina GCCCTGGTGC (4) 37 0.037 P2.5 retina TAAAAGAAAA (6) 26.4 0.0264 P2.5 retina TGTATCTTTT (9) 1.8 0.0018 P4.5 retina GCCCTGGTGC (4) 49.5 0.0495 P4.5 retina TAAAAGAAAA (6) 47.6 0.0476 P4.5 retina GCAGTGCGGG (4) 4 0.004 P4.5 retina TGTATCTTTT (9) 2 0.002 P6.5 retina GCCCTGGTGC (4) 50 0.05 P6.5 retina TAAAAGAAAA (6) 28.3 0.0283 P6.5 retina TGTATCTTTT (9) 1.7 0.0017 P10.5 crx- retina GCCCTGGTGC (4) 42.7 0.0427 P10.5 crx- retina TAAAAGAAAA (6) 20.4 0.0204 P10.5 crx- retina GCAGTGCGGG (4) 11.1 0.0111 P10.5 crx+ retina GCCCTGGTGC (4) 34.6 0.0346 P10.5 crx+ retina TAAAAGAAAA (6) 13.5 0.0135 P10.5 crx+ retina TGTATCTTTT (9) 3.8 0.0038 P10.5 crx+ retina GTGGGATCCG 1.9 0.0019 Adult retinal GCCCTGGTGC (4) 16.7 0.0167 Adult retinal TAAAAGAAAA (6) 3.7 0.0037 Adult retinal GCAGTGCGGG (4) 1.9 0.0019 ONL GCCCTGGTGC (4) 28.7 0.0287 ONL TAAAAGAAAA (6) 21.1 0.0211