Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3929	Zfhx1a	zinc finger homeobox 1a	18	18 0.0 cM	21417
Gene Ontology	DNA binding | nucleic acid binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex | zinc ion binding
Human Homolog	TCF8[transcription factor 8 (represses interleukin 2 expression)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTCATTTTCT (4) 8.2 0.0082 P8 Cb GC AAGCAGCAGC (8) 4.9 0.0049 P8 Cb GC CTATGAGTCG (2) 3.3 0.0033 P8 Cb GC GCTCCTGTGC 3.3 0.0033 Cb medulloblastoma AAGCAGCAGC (8) 9.2 0.0092 Cb medulloblastoma GTCATTTTCT (4) 6.9 0.0069 P8 GC+1d culture AAGCAGCAGC (8) 10.3 0.0103 P8 GC+1d culture GTCATTTTCT (4) 8 0.008 P8 GC+1d culture CTATGAGTCG (2) 2.3 0.0023 P8 GC+1d culture GCTCCTGTGC 1.1 0.0011 P8 GC+SHH+1d culture AAGCAGCAGC (8) 8.2 0.0082 P8 GC+SHH+1d culture GTCATTTTCT (4) 4.7 0.0047 3T3 fibroblasts AAGCAGCAGC (8) 14 0.014 E15 cortex AAGCAGCAGC (8) 29.7 0.0297 P1 cortex AAGCAGCAGC (8) 18.2 0.0182 Hypothalamus AAGCAGCAGC (8) 5.4 0.0054 Hypothalamus GCTCCTGTGC 1.8 0.0018 Hypothalamus GTCATTTTCT (4) 1.8 0.0018 E12.5 retina AAGCAGCAGC (8) 15 0.015 E12.5 retina GTCATTTTCT (4) 1.9 0.0019 E14.5 retina GTCATTTTCT (4) 5.5 0.0055 E14.5 retina AAGCAGCAGC (8) 1.8 0.0018 E16.5 retina AAGCAGCAGC (8) 12.7 0.0127 E16.5 retina CTATGAGTCG (2) 1.8 0.0018 E18.5 retina AAGCAGCAGC (8) 5.5 0.0055 E18.5 retina GCTCCTGTGC 1.8 0.0018 P0.5 retina AAGCAGCAGC (8) 11.8 0.0118 P0.5 retina GTCATTTTCT (4) 2 0.002 P2.5 retina AAGCAGCAGC (8) 15.8 0.0158 P2.5 retina GTCATTTTCT (4) 1.8 0.0018 P4.5 retina GTCATTTTCT (4) 4 0.004 P6.5 retina AAGCAGCAGC (8) 5 0.005 P6.5 retina GTCATTTTCT (4) 1.7 0.0017 P10.5 crx- retina AAGCAGCAGC (8) 20.4 0.0204 P10.5 crx- retina GTCATTTTCT (4) 3.7 0.0037 P10.5 crx+ retina AAGCAGCAGC (8) 5.8 0.0058 P10.5 crx+ retina GCTCCTGTGC 1.9 0.0019 P10.5 crx+ retina GTCATTTTCT (4) 1.9 0.0019 Adult retinal AAGCAGCAGC (8) 7.4 0.0074 Adult retinal CTATGAGTCG (2) 1.9 0.0019 Adult retinal GCTCCTGTGC 1.9 0.0019 Adult retinal GTCATTTTCT (4) 1.9 0.0019 ONL AAGCAGCAGC (8) 1.9 0.0019 ONL GTCATTTTCT (4) 1.9 0.0019