Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.39472	Fdps	farnesyl diphosphate synthetase	3	3 42.6 cM	110196
Gene Ontology	transferase activity
Human Homolog	FDPS[farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAACTTGCAA (2) 6.5 0.0065 P8 Cb GC AATATGGATG (6) 3.3 0.0033 P8 Cb GC CACACCCAGG (3) 1.6 0.0016 P8 Cb GC TACTCTTCCC (5) 1.6 0.0016 Cb medulloblastoma AATATGGATG (6) 9.2 0.0092 P8 GC+1d culture GAACTTGCAA (2) 29.7 0.0297 P8 GC+1d culture AATATGGATG (6) 8 0.008 P8 GC+1d culture GCAGGGATTG (2) 1.1 0.0011 P8 GC+1d culture TACTCTTCCC (5) 1.1 0.0011 P8 GC+SHH+1d culture GAACTTGCAA (2) 26.9 0.0269 P8 GC+SHH+1d culture AATATGGATG (6) 5.9 0.0059 P8 GC+SHH+1d culture CACTCACACC (3) 1.2 0.0012 P8 GC+SHH+1d culture GACTCTTCCC (3) 1.2 0.0012 P8 GC+SHH+1d culture GGCGCAAAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture TACTCTTCCC (5) 1.2 0.0012 3T3 fibroblasts GAACTTGCAA (2) 24.5 0.0245 3T3 fibroblasts GGCGCAAAAA (5) 3.5 0.0035 E15 cortex GAACTTGCAA (2) 9.9 0.0099 E15 cortex GACTCTTCCC (3) 4.9 0.0049 P1 cortex GAACTTGCAA (2) 9.1 0.0091 P1 cortex AATATGGATG (6) 4.5 0.0045 Hypothalamus GAACTTGCAA (2) 7.2 0.0072 Hypothalamus AATATGGATG (6) 5.4 0.0054 Hypothalamus AAGATGGATG 1.8 0.0018 Hypothalamus CACTCACACC (3) 1.8 0.0018 Hypothalamus TACTCTTCCC (5) 1.8 0.0018 E12.5 retina GAACTTGCAA (2) 22.5 0.0225 E12.5 retina AATATGGATG (6) 15 0.015 E12.5 retina TACTCTTCCC (5) 3.8 0.0038 E12.5 retina CACTCACACC (3) 1.9 0.0019 E12.5 retina GCAGGGATTG (2) 1.9 0.0019 E14.5 retina GAACTTGCAA (2) 31 0.031 E14.5 retina AATATGGATG (6) 7.3 0.0073 E14.5 retina TACTCTTCCC (5) 1.8 0.0018 E16.5 retina GAACTTGCAA (2) 25.4 0.0254 E16.5 retina AATATGGATG (6) 9.1 0.0091 E16.5 retina TACTCTTCCC (5) 1.8 0.0018 E18.5 retina GAACTTGCAA (2) 16.4 0.0164 E18.5 retina TACTCTTCCC (5) 3.6 0.0036 E18.5 retina GGCGCAAAAA (5) 1.8 0.0018 P0.5 retina GAACTTGCAA (2) 11.8 0.0118 P0.5 retina TACTCTTCCC (5) 2 0.002 P2.5 retina GAACTTGCAA (2) 5.3 0.0053 P2.5 retina AAGATGGATG 1.8 0.0018 P2.5 retina AATATGGATG (6) 1.8 0.0018 P2.5 retina CACTCACACC (3) 1.8 0.0018 P2.5 retina TACTCTTCCC (5) 1.8 0.0018 P4.5 retina GAACTTGCAA (2) 13.9 0.0139 P4.5 retina AATATGGATG (6) 5.9 0.0059 P4.5 retina GCAGGGATTG (2) 2 0.002 P4.5 retina TACTCTTCCC (5) 2 0.002 P6.5 retina GAACTTGCAA (2) 8.3 0.0083 P6.5 retina AATATGGATG (6) 5 0.005 P6.5 retina CACTCACACC (3) 5 0.005 P6.5 retina TACTCTTCCC (5) 3.3 0.0033 P10.5 crx- retina AATATGGATG (6) 11.1 0.0111 P10.5 crx- retina GAACTTGCAA (2) 7.4 0.0074 P10.5 crx- retina CACTCACACC (3) 1.9 0.0019 P10.5 crx- retina GGCGCAAAAA (5) 1.9 0.0019 P10.5 crx+ retina GAACTTGCAA (2) 21.1 0.0211 P10.5 crx+ retina AATATGGATG (6) 5.8 0.0058 P10.5 crx+ retina CACACCCAGG (3) 1.9 0.0019 P10.5 crx+ retina TACTCTTCCC (5) 1.9 0.0019 Adult retinal AATATGGATG (6) 11.1 0.0111 Adult retinal CACACCCAGG (3) 1.9 0.0019 Adult retinal CACTCACACC (3) 1.9 0.0019 Adult retinal GACTCTTCCC (3) 1.9 0.0019 Adult retinal GGCGCAAAAA (5) 1.9 0.0019 ONL AATATGGATG (6) 9.6 0.0096 ONL GAACTTGCAA (2) 7.7 0.0077 ONL AAGATGGATG 1.9 0.0019