Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.39599
G630023A01Rik
RIKEN cDNA G630023A01 gene
7
101686
Mm.39599
C230098I05Rik
RIKEN cDNA C230098I05 gene
7
269994
Human Homolog
MGC18079[hypothetical protein MGC18079]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAAAAAAAA (
157
)
47.3
0.0473
P8 Cb GC
CAAGTGAAAA (
3
)
1.6
0.0016
P8 Cb GC
GGCATTGACC
(
2
)
1.6
0.0016
Cb medulloblastoma
CAAAAAAAAA (
157
)
92.5
0.0925
Cb medulloblastoma
CACGTAAAAA (
3
)
2.3
0.0023
P8 GC+1d culture
CAAAAAAAAA (
157
)
37.7
0.0377
P8 GC+1d culture
CACGTAAAAA (
3
)
1.1
0.0011
P8 GC+1d culture
TGCCAGCATT (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CAAAAAAAAA (
157
)
58.5
0.0585
P8 GC+SHH+1d culture
CAAGTGAAAA (
3
)
2.3
0.0023
3T3 fibroblasts
TGCCAGCATT (
3
)
3.5
0.0035
E15 cortex
CAAAAAAAAA (
157
)
34.6
0.0346
E15 cortex
GGCATTGACC
(
2
)
4.9
0.0049
P1 cortex
CAAAAAAAAA (
157
)
22.7
0.0227
Hypothalamus
CAAAAAAAAA (
157
)
39.8
0.0398
E12.5 retina
CAAAAAAAAA (
157
)
22.5
0.0225
E14.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E16.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E18.5 retina
CAAAAAAAAA (
157
)
41.8
0.0418
E18.5 retina
CAAGTGAAAA (
3
)
1.8
0.0018
P0.5 retina
CAAAAAAAAA (
157
)
137.4
0.1374
P0.5 retina
TGCCAGCATT (
3
)
2
0.002
P2.5 retina
CAAAAAAAAA (
157
)
52.8
0.0528
P2.5 retina
CACGTAAAAA (
3
)
1.8
0.0018
P2.5 retina
GCGGCATCTG
(
8
)
1.8
0.0018
P4.5 retina
CAAAAAAAAA (
157
)
41.6
0.0416
P6.5 retina
CAAAAAAAAA (
157
)
31.7
0.0317
P6.5 retina
CACGTAAAAA (
3
)
3.3
0.0033
P10.5 crx- retina
CAAAAAAAAA (
157
)
13
0.013
P10.5 crx- retina
GCGGCATCTG
(
8
)
1.9
0.0019
P10.5 crx+ retina
CAAAAAAAAA (
157
)
32.7
0.0327
P10.5 crx+ retina
CAAGTGAAAA (
3
)
1.9
0.0019
P10.5 crx+ retina
CACGTAAAAA (
3
)
1.9
0.0019
P10.5 crx+ retina
GGCATTGACC
(
2
)
1.9
0.0019
Adult retinal
CAAAAAAAAA (
157
)
20.4
0.0204
Adult retinal
CAAGTGAAAA (
3
)
1.9
0.0019
ONL
CAAAAAAAAA (
157
)
17.2
0.0172
