Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.3973
Stx8
syntaxin 8
11
55943
Mm.3973
Ntn1
netrin 1
11
18208
Mm.3973
C78197
expressed sequence C78197
11
97702
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 79 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAAAAAAAA (
204
)
45.7
0.0457
P8 Cb GC
TAGGGCCCAC
(
3
)
6.5
0.0065
P8 Cb GC
ATAGAACTAA
(
3
)
4.9
0.0049
P8 Cb GC
GCAGAAAGCA (
10
)
4.9
0.0049
Cb medulloblastoma
GAAAAAAAAA (
204
)
173.4
0.1734
Cb medulloblastoma
ATAGAACTAA
(
3
)
9.2
0.0092
Cb medulloblastoma
ATGGTGTCAG (
5
)
9.2
0.0092
Cb medulloblastoma
TAGGGCCCAC
(
3
)
6.9
0.0069
Cb medulloblastoma
GTGATTTTAT
(
3
)
4.6
0.0046
Cb medulloblastoma
ATGTGATTGC
(
4
)
2.3
0.0023
Cb medulloblastoma
GCCCCGGACC
(
3
)
2.3
0.0023
Cb medulloblastoma
TGTAATTTCC (
5
)
2.3
0.0023
P8 GC+1d culture
GAAAAAAAAA (
204
)
41.1
0.0411
P8 GC+1d culture
TAGGGCCCAC
(
3
)
8
0.008
P8 GC+1d culture
ATAGAACTAA
(
3
)
6.8
0.0068
P8 GC+1d culture
GTGATTTTAT
(
3
)
3.4
0.0034
P8 GC+1d culture
AGCACACAGA (
6
)
2.3
0.0023
P8 GC+1d culture
GCAGAAAGCA (
10
)
2.3
0.0023
P8 GC+1d culture
GCCATCTGAG
(
8
)
1.1
0.0011
P8 GC+1d culture
TGTAATTTCC (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
GAAAAAAAAA (
204
)
77.3
0.0773
P8 GC+SHH+1d culture
ATAGAACTAA
(
3
)
7
0.007
P8 GC+SHH+1d culture
TAGGGCCCAC
(
3
)
4.7
0.0047
P8 GC+SHH+1d culture
TGTAATTTCC (
5
)
3.5
0.0035
P8 GC+SHH+1d culture
GCAGAAAGCA (
10
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGATTTTAT
(
3
)
1.2
0.0012
3T3 fibroblasts
TAGGGCCCAC
(
3
)
3.5
0.0035
E15 cortex
GAAAAAAAAA (
204
)
54.4
0.0544
P1 cortex
GAAAAAAAAA (
204
)
45.5
0.0455
P1 cortex
GTGATTTTAT
(
3
)
4.5
0.0045
Hypothalamus
GAAAAAAAAA (
204
)
67
0.067
Hypothalamus
AGCACACAGA (
6
)
1.8
0.0018
Hypothalamus
ATGGTGTCAG (
5
)
1.8
0.0018
Hypothalamus
GCAGAAAGCA (
10
)
1.8
0.0018
E12.5 retina
GAAAAAAAAA (
204
)
46.9
0.0469
E12.5 retina
GCAGAAAGCA (
10
)
3.8
0.0038
E12.5 retina
AGCACACAGA (
6
)
1.9
0.0019
E12.5 retina
ATGTGATTGC
(
4
)
1.9
0.0019
E14.5 retina
GAAAAAAAAA (
204
)
34.6
0.0346
E16.5 retina
GAAAAAAAAA (
204
)
23.5
0.0235
E16.5 retina
GCAGAAAGCA (
10
)
1.8
0.0018
E16.5 retina
GCCATCTGAG
(
8
)
1.8
0.0018
E16.5 retina
GCCCCGGACC
(
3
)
1.8
0.0018
E16.5 retina
TGTAATTTCC (
5
)
1.8
0.0018
E18.5 retina
GAAAAAAAAA (
204
)
65.5
0.0655
E18.5 retina
GCAGAAAGCA (
10
)
3.6
0.0036
E18.5 retina
GCCATCTGAG
(
8
)
3.6
0.0036
E18.5 retina
ATGTGATTGC
(
4
)
1.8
0.0018
P0.5 retina
GAAAAAAAAA (
204
)
35.3
0.0353
P0.5 retina
TGTAATTTCC (
5
)
3.9
0.0039
P0.5 retina
GCAGAAAGCA (
10
)
2
0.002
P2.5 retina
GAAAAAAAAA (
204
)
86.2
0.0862
P2.5 retina
GCAGAAAGCA (
10
)
5.3
0.0053
P2.5 retina
TGTAATTTCC (
5
)
1.8
0.0018
P4.5 retina
GAAAAAAAAA (
204
)
51.5
0.0515
P4.5 retina
GCAGAAAGCA (
10
)
13.9
0.0139
P4.5 retina
GTGATTTTAT
(
3
)
4
0.004
P4.5 retina
GCCATCTGAG
(
8
)
2
0.002
P6.5 retina
GAAAAAAAAA (
204
)
40
0.04
P6.5 retina
GCAGAAAGCA (
10
)
25
0.025
P6.5 retina
GCCATCTGAG
(
8
)
1.7
0.0017
P6.5 retina
GTGATTTTAT
(
3
)
1.7
0.0017
P10.5 crx- retina
GAAAAAAAAA (
204
)
16.7
0.0167
P10.5 crx- retina
GCAGAAAGCA (
10
)
13
0.013
P10.5 crx- retina
TGTAATTTCC (
5
)
3.7
0.0037
P10.5 crx- retina
ATGTGATTGC
(
4
)
1.9
0.0019
P10.5 crx- retina
GTGATTTTAT
(
3
)
1.9
0.0019
P10.5 crx+ retina
GAAAAAAAAA (
204
)
42.3
0.0423
P10.5 crx+ retina
AGCACACAGA (
6
)
1.9
0.0019
P10.5 crx+ retina
ATGTGATTGC
(
4
)
1.9
0.0019
P10.5 crx+ retina
GTGATTTTAT
(
3
)
1.9
0.0019
Adult retinal
GAAAAAAAAA (
204
)
16.7
0.0167
Adult retinal
GCCATCTGAG
(
8
)
1.9
0.0019
Adult retinal
GTGATTTTAT
(
3
)
1.9
0.0019
ONL
GAAAAAAAAA (
204
)
24.9
0.0249
ONL
TGTAATTTCC (
5
)
5.7
0.0057
ONL
GCAGAAAGCA (
10
)
3.8
0.0038
ONL
GCCATCTGAG
(
8
)
1.9
0.0019
ONL
GCCCCGGACC
(
3
)
1.9
0.0019