Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.3988
Sil
Tal1 interrupting locus
4
20460
Human Homolog
SIL[TAL1 (SCL) interrupting locus]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 29 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACCTTTGGAA
(
5
)
1.6
0.0016
P8 Cb GC
TGTGTAGCAA
1.6
0.0016
Cb medulloblastoma
CCTTCTTTCA (
2
)
4.6
0.0046
Cb medulloblastoma
ACCTTTGGAA
(
5
)
2.3
0.0023
Cb medulloblastoma
CAAAAGGAAG
(
5
)
2.3
0.0023
Cb medulloblastoma
GATTCTGTGG
(
5
)
2.3
0.0023
P8 GC+1d culture
TGTGTAGCAA
2.3
0.0023
P8 GC+1d culture
CAAGGAAAAA
(
6
)
1.1
0.0011
P8 GC+1d culture
GATTCTGTGG
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTCTTTCA (
2
)
1.2
0.0012
3T3 fibroblasts
GATTCTGTGG
(
5
)
3.5
0.0035
3T3 fibroblasts
TGTGTAGCAA
3.5
0.0035
P1 cortex
ACCTTTGGAA
(
5
)
4.5
0.0045
Hypothalamus
CAAGGAAAAA
(
6
)
1.8
0.0018
Hypothalamus
TGTGTAGCAA
1.8
0.0018
E12.5 retina
CCTTCTTTCA (
2
)
1.9
0.0019
E14.5 retina
CAAAAGGAAG
(
5
)
1.8
0.0018
E14.5 retina
CCTTCTTTCA (
2
)
1.8
0.0018
E16.5 retina
CCTTCTTTCA (
2
)
1.8
0.0018
P0.5 retina
CCTTCTTTCA (
2
)
2
0.002
P2.5 retina
CCTTCTTTCA (
2
)
1.8
0.0018
P4.5 retina
CAAGGAAAAA
(
6
)
2
0.002
P4.5 retina
CCTTCTTTCA (
2
)
2
0.002
P6.5 retina
ACCTTTGGAA
(
5
)
3.3
0.0033
P6.5 retina
CCTTCTTTCA (
2
)
3.3
0.0033
P6.5 retina
CAAAAGGAAG
(
5
)
1.7
0.0017
P6.5 retina
CAAGGAAAAA
(
6
)
1.7
0.0017
P10.5 crx- retina
CCTTCTTTCA (
2
)
7.4
0.0074
P10.5 crx- retina
CAAGGAAAAA
(
6
)
1.9
0.0019
