Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.39965	AI449032	expressed sequence AI449032	4		100126
Mm.39965	Cdk5rap2	CDK5 regulatory subunit associated protein 2	4		214444
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	CDK5RAP2[CDK5 regulatory subunit associated protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCCCAGGTG (3) 8.2 0.0082 P8 Cb GC GCATTAAAAT (4) 6.5 0.0065 P8 Cb GC AAGGACTTTG (7) 1.6 0.0016 Cb medulloblastoma GCATTAAAAT (4) 2.3 0.0023 Cb medulloblastoma TGCACAAAAG (7) 2.3 0.0023 P8 GC+1d culture GCATTAAAAT (4) 4.6 0.0046 P8 GC+1d culture TGCCCAGGGC (7) 4.6 0.0046 P8 GC+1d culture AAGGACTTTG (7) 3.4 0.0034 P8 GC+1d culture AGGAGACCTT (7) 2.3 0.0023 P8 GC+1d culture ACCCCAGGTG (3) 1.1 0.0011 P8 GC+SHH+1d culture GCATTAAAAT (4) 8.2 0.0082 P8 GC+SHH+1d culture TGCCCAGGGC (7) 3.5 0.0035 P8 GC+SHH+1d culture AAGGACTTTG (7) 2.3 0.0023 P8 GC+SHH+1d culture AGGAGACCTT (7) 1.2 0.0012 P8 GC+SHH+1d culture TATAATTAAA (5) 1.2 0.0012 3T3 fibroblasts ACCCCAGGTG (3) 7 0.007 E15 cortex ACCCCAGGTG (3) 4.9 0.0049 P1 cortex GCATTAAAAT (4) 9.1 0.0091 P1 cortex ACCCCAGGTG (3) 4.5 0.0045 P1 cortex TATAATTAAA (5) 4.5 0.0045 Hypothalamus GCATTAAAAT (4) 5.4 0.0054 Hypothalamus ACCCCAGGTG (3) 3.6 0.0036 Hypothalamus TATAATTAAA (5) 3.6 0.0036 Hypothalamus AAGGACTTTG (7) 1.8 0.0018 Hypothalamus TGCCCAGGGC (7) 1.8 0.0018 E12.5 retina AGGAGACCTT (7) 9.4 0.0094 E12.5 retina ACCCCAGGTG (3) 7.5 0.0075 E12.5 retina GCATTAAAAT (4) 5.6 0.0056 E14.5 retina GCATTAAAAT (4) 12.8 0.0128 E14.5 retina ACCCCAGGTG (3) 3.6 0.0036 E14.5 retina AGGAGACCTT (7) 3.6 0.0036 E14.5 retina TGCCCAGGGC (7) 3.6 0.0036 E14.5 retina AAGGACTTTG (7) 1.8 0.0018 E16.5 retina GCATTAAAAT (4) 5.4 0.0054 E16.5 retina ACCCCAGGTG (3) 1.8 0.0018 E16.5 retina TATAATTAAA (5) 1.8 0.0018 E16.5 retina TGCACAAAAG (7) 1.8 0.0018 E16.5 retina TGCCCAGGGC (7) 1.8 0.0018 E16.5 retina TTAGTTTTCC (2) 1.8 0.0018 E18.5 retina GCATTAAAAT (4) 16.4 0.0164 E18.5 retina ACCCCAGGTG (3) 3.6 0.0036 E18.5 retina AAGGACTTTG (7) 1.8 0.0018 P0.5 retina GCATTAAAAT (4) 3.9 0.0039 P0.5 retina ACCCCAGGTG (3) 2 0.002 P0.5 retina TGCCCAGGGC (7) 2 0.002 P2.5 retina GCATTAAAAT (4) 7 0.007 P2.5 retina ACCCCAGGTG (3) 5.3 0.0053 P2.5 retina TGCCCAGGGC (7) 3.5 0.0035 P2.5 retina AAGGACTTTG (7) 1.8 0.0018 P2.5 retina AGGAGACCTT (7) 1.8 0.0018 P2.5 retina TATAATTAAA (5) 1.8 0.0018 P4.5 retina GCATTAAAAT (4) 9.9 0.0099 P4.5 retina ACCCCAGGTG (3) 7.9 0.0079 P4.5 retina AGGAGACCTT (7) 2 0.002 P4.5 retina TGCCCAGGGC (7) 2 0.002 P6.5 retina GCATTAAAAT (4) 11.7 0.0117 P6.5 retina AAGGACTTTG (7) 6.7 0.0067 P6.5 retina ACCCCAGGTG (3) 1.7 0.0017 P6.5 retina TTAGTTTTCC (2) 1.7 0.0017 P10.5 crx- retina ACCCCAGGTG (3) 5.6 0.0056 P10.5 crx- retina AAGGACTTTG (7) 3.7 0.0037 P10.5 crx- retina GCATTAAAAT (4) 3.7 0.0037 P10.5 crx- retina TGCCCAGGGC (7) 1.9 0.0019 P10.5 crx+ retina ACCCCAGGTG (3) 7.7 0.0077 P10.5 crx+ retina GCATTAAAAT (4) 1.9 0.0019 P10.5 crx+ retina TGCCCAGGGC (7) 1.9 0.0019 P10.5 crx+ retina TTAGTTTTCC (2) 1.9 0.0019 Adult retinal ACCCCAGGTG (3) 3.7 0.0037 Adult retinal AGGAGACCTT (7) 3.7 0.0037 Adult retinal TGCCCAGGGC (7) 3.7 0.0037 ONL AAGGACTTTG (7) 1.9 0.0019 ONL ACCCCAGGTG (3) 1.9 0.0019 ONL GCATTAAAAT (4) 1.9 0.0019 ONL TGCACAAAAG (7) 1.9 0.0019