Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.40370	Ssa2	Sjogren syndrome antigen A2	1	1 78.7 cM	20822
Gene Ontology	ribonucleoprotein complex | RNA binding | viral nucleocapsid
Human Homolog	SSA2[Sjogren syndrome antigen A2 (60kDa, ribonucleoprotein autoantigen SS-A/Ro)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTATTCC (18) 3.3 0.0033 P8 Cb GC TTTTAATTGC (5) 1.6 0.0016 Cb medulloblastoma CATCACCACA (7) 4.6 0.0046 P8 GC+1d culture CCTTTATTCC (18) 6.8 0.0068 P8 GC+1d culture CATCACCACA (7) 5.7 0.0057 P8 GC+SHH+1d culture CATCACCACA (7) 2.3 0.0023 P8 GC+SHH+1d culture CCTTTATTCC (18) 1.2 0.0012 P8 GC+SHH+1d culture TATGTAACTC (2) 1.2 0.0012 P1 cortex CCTTTATTCC (18) 27.3 0.0273 Hypothalamus CATCACCACA (7) 1.8 0.0018 Hypothalamus TTTTAATTGC (5) 1.8 0.0018 E12.5 retina CCTTTATTCC (18) 5.6 0.0056 E12.5 retina CATCACCACA (7) 1.9 0.0019 E14.5 retina CCTTTATTCC (18) 12.8 0.0128 E14.5 retina CATCACCACA (7) 1.8 0.0018 E16.5 retina CCTTTATTCC (18) 3.6 0.0036 E16.5 retina CATCACCACA (7) 1.8 0.0018 E16.5 retina TTTTAATTGC (5) 1.8 0.0018 E18.5 retina CCTTTATTCC (18) 7.3 0.0073 P0.5 retina CCTTTATTCC (18) 2 0.002 P0.5 retina TATGTAACTC (2) 2 0.002 P2.5 retina CCTTTATTCC (18) 3.5 0.0035 P2.5 retina TATGTAACTC (2) 1.8 0.0018 P4.5 retina CCTTTATTCC (18) 7.9 0.0079 P4.5 retina CATCACCACA (7) 2 0.002 P6.5 retina CCTTTATTCC (18) 5 0.005 P10.5 crx- retina CATCACCACA (7) 5.6 0.0056 P10.5 crx- retina CCTTTATTCC (18) 3.7 0.0037 P10.5 crx- retina TTTTAATTGC (5) 1.9 0.0019 P10.5 crx+ retina CCTTTATTCC (18) 7.7 0.0077 P10.5 crx+ retina CATCACCACA (7) 1.9 0.0019 P10.5 crx+ retina TATGTAACTC (2) 1.9 0.0019 P10.5 crx+ retina TTTTAATTGC (5) 1.9 0.0019 Adult retinal CATCACCACA (7) 1.9 0.0019 Adult retinal CCTTTATTCC (18) 1.9 0.0019 ONL CATCACCACA (7) 1.9 0.0019 ONL CCTTTATTCC (18) 1.9 0.0019 ONL TATGTAACTC (2) 1.9 0.0019