Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.40986	D16Ium14e	DNA segment, Chr 16, Indiana University Medical 14, expressed	16		28055
Mm.40986	Usp25	ubiquitin specific protease 25	16		30940
Gene Ontology	cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | peptidase activity | proteasome complex (sensu Eukarya) | ubiquitin thiolesterase activity | ubiquitin-dependent protein catabolism | ubiquitin-specific protease activity
Human Homolog	USP25[ubiquitin specific protease 25]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAAAAAAAA (50) 14.7 0.0147 P8 Cb GC TATGTGTGTG (19) 1.6 0.0016 P8 Cb GC TTACCACCGA (2) 1.6 0.0016 Cb medulloblastoma GCAAAAAAAA (50) 60.1 0.0601 Cb medulloblastoma TTACCACCGA (2) 4.6 0.0046 Cb medulloblastoma TTATGTTCAG (5) 4.6 0.0046 Cb medulloblastoma ATCTGAAATA (5) 2.3 0.0023 P8 GC+1d culture GCAAAAAAAA (50) 12.6 0.0126 P8 GC+1d culture TATGTGTGTG (19) 5.7 0.0057 P8 GC+1d culture GCACTCACCT (4) 2.3 0.0023 P8 GC+1d culture ATCTGAAATA (5) 1.1 0.0011 P8 GC+1d culture TTACCACCGA (2) 1.1 0.0011 P8 GC+SHH+1d culture GCAAAAAAAA (50) 29.3 0.0293 P8 GC+SHH+1d culture TATGTGTGTG (19) 8.2 0.0082 P8 GC+SHH+1d culture TTACCACCGA (2) 2.3 0.0023 P8 GC+SHH+1d culture TTATGTTCAG (5) 2.3 0.0023 3T3 fibroblasts GCAAAAAAAA (50) 3.5 0.0035 3T3 fibroblasts TATGTGTGTG (19) 3.5 0.0035 3T3 fibroblasts TTACCACCGA (2) 3.5 0.0035 E15 cortex GCAAAAAAAA (50) 9.9 0.0099 P1 cortex TATGTGTGTG (19) 9.1 0.0091 P1 cortex ATCTGAAATA (5) 4.5 0.0045 P1 cortex GCAAAAAAAA (50) 4.5 0.0045 Hypothalamus GCAAAAAAAA (50) 19.9 0.0199 Hypothalamus GGAAGAGCTA (3) 5.4 0.0054 Hypothalamus TTACCACCGA (2) 5.4 0.0054 Hypothalamus ATCTGAAATA (5) 3.6 0.0036 Hypothalamus TTATGTTCAG (5) 3.6 0.0036 E12.5 retina GCAAAAAAAA (50) 9.4 0.0094 E12.5 retina TTACCACCGA (2) 5.6 0.0056 E12.5 retina TTATGTTCAG (5) 3.8 0.0038 E12.5 retina GGAAGAGCTA (3) 1.9 0.0019 E12.5 retina TATGTGTGTG (19) 1.9 0.0019 E14.5 retina GCAAAAAAAA (50) 12.8 0.0128 E14.5 retina TTACCACCGA (2) 1.8 0.0018 E14.5 retina TTATGTTCAG (5) 1.8 0.0018 E16.5 retina GCAAAAAAAA (50) 10.9 0.0109 E16.5 retina TTACCACCGA (2) 7.2 0.0072 E16.5 retina TTATGTTCAG (5) 3.6 0.0036 E18.5 retina GCAAAAAAAA (50) 25.5 0.0255 E18.5 retina ATCTGAAATA (5) 1.8 0.0018 E18.5 retina TTACCACCGA (2) 1.8 0.0018 P0.5 retina GCAAAAAAAA (50) 17.7 0.0177 P0.5 retina TTATGTTCAG (5) 7.9 0.0079 P0.5 retina TATGTGTGTG (19) 3.9 0.0039 P0.5 retina TTACCACCGA (2) 2 0.002 P2.5 retina GCAAAAAAAA (50) 22.9 0.0229 P2.5 retina TTATGTTCAG (5) 12.3 0.0123 P2.5 retina TTACCACCGA (2) 5.3 0.0053 P2.5 retina GGAAGAGCTA (3) 1.8 0.0018 P2.5 retina TATGTGTGTG (19) 1.8 0.0018 P4.5 retina GCAAAAAAAA (50) 25.8 0.0258 P4.5 retina TTACCACCGA (2) 2 0.002 P4.5 retina TTATGTTCAG (5) 2 0.002 P6.5 retina GCAAAAAAAA (50) 11.7 0.0117 P6.5 retina TTATGTTCAG (5) 5 0.005 P6.5 retina ATCTGAAATA (5) 1.7 0.0017 P6.5 retina GCACTCACCT (4) 1.7 0.0017 P6.5 retina TTACCACCGA (2) 1.7 0.0017 P10.5 crx- retina TTATGTTCAG (5) 9.3 0.0093 P10.5 crx- retina GCAAAAAAAA (50) 5.6 0.0056 P10.5 crx- retina TATGTGTGTG (19) 1.9 0.0019 P10.5 crx+ retina TTATGTTCAG (5) 5.8 0.0058 P10.5 crx+ retina TTACCACCGA (2) 3.8 0.0038 P10.5 crx+ retina GCAAAAAAAA (50) 1.9 0.0019 P10.5 crx+ retina GGAAGAGCTA (3) 1.9 0.0019 P10.5 crx+ retina TATGTGTGTG (19) 1.9 0.0019 Adult retinal GCAAAAAAAA (50) 11.1 0.0111 Adult retinal TTACCACCGA (2) 3.7 0.0037 Adult retinal TATGTGTGTG (19) 1.9 0.0019 Adult retinal TTATGTTCAG (5) 1.9 0.0019 ONL TTATGTTCAG (5) 7.7 0.0077 ONL GCAAAAAAAA (50) 1.9 0.0019