Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41	Atp5o	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	16	12 39.0 cM	28080
Gene Ontology	ATP biosynthesis | ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen transport | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | mitochondrion | mitochondrion | proton transport | proton-transporting two-sector ATPase complex
Human Homolog	ATP5O[ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit (oligomycin sensitivity conferring protein)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 125 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGGGAGATGC 91.4 0.0914 P8 Cb GC AAGAGAAAGA (17) 4.9 0.0049 P8 Cb GC GTCGGCCGCC (25) 3.3 0.0033 P8 Cb GC AACGAGGAAG (3) 1.6 0.0016 P8 Cb GC CGGGAGAGCT 1.6 0.0016 Cb medulloblastoma CGGGAGATGC 83.2 0.0832 Cb medulloblastoma ATCAAAAAAA (16) 6.9 0.0069 Cb medulloblastoma AAGAGAAAGA (17) 4.6 0.0046 Cb medulloblastoma CGGGAAAATG (3) 4.6 0.0046 Cb medulloblastoma AGGTTGGCCG (3) 2.3 0.0023 P8 GC+1d culture CGGGAGATGC 43.4 0.0434 P8 GC+1d culture AAGAGAAAGA (17) 9.1 0.0091 P8 GC+1d culture ATCAAAAAAA (16) 4.6 0.0046 P8 GC+1d culture GTCGGCCGCC (25) 1.1 0.0011 P8 GC+SHH+1d culture CGGGAGATGC 60.9 0.0609 P8 GC+SHH+1d culture AAGAGAAAGA (17) 7 0.007 P8 GC+SHH+1d culture GTCGGCCGCC (25) 4.7 0.0047 P8 GC+SHH+1d culture ATCAAAAAAA (16) 3.5 0.0035 P8 GC+SHH+1d culture CGGGAGATGA 1.2 0.0012 3T3 fibroblasts CGGGAGATGC 63.1 0.0631 3T3 fibroblasts CGGGAGATGT 3.5 0.0035 3T3 fibroblasts CGGGGAGATG (5) 3.5 0.0035 3T3 fibroblasts GTCGGCCGCC (25) 3.5 0.0035 E15 cortex CGGGAGATGC 44.5 0.0445 E15 cortex GGCGGGATGA (3) 9.9 0.0099 E15 cortex AGGTTGGCCG (3) 4.9 0.0049 E15 cortex CACAGTGACC 4.9 0.0049 E15 cortex CTGGAAAAAA (10) 4.9 0.0049 P1 cortex CGGGAGATGC 18.2 0.0182 P1 cortex ATCAAAAAAA (16) 9.1 0.0091 P1 cortex AAGAGAAAGA (17) 4.5 0.0045 P1 cortex AGGTTGGCCG (3) 4.5 0.0045 Hypothalamus CGGGAGATGC 81.5 0.0815 Hypothalamus AAGAGAAAGA (17) 14.5 0.0145 Hypothalamus ATCAAAAAAA (16) 7.2 0.0072 Hypothalamus ATGGTGGAAA (8) 5.4 0.0054 Hypothalamus AGGTTGGCCG (3) 3.6 0.0036 Hypothalamus GGCGGGATGA (3) 1.8 0.0018 Hypothalamus GTCGGCCGCC (25) 1.8 0.0018 E12.5 retina CGGGAGATGC 84.5 0.0845 E12.5 retina AAGAGAAAGA (17) 7.5 0.0075 E12.5 retina ATCAAAAAAA (16) 3.8 0.0038 E12.5 retina AGGTTGGCCG (3) 1.9 0.0019 E12.5 retina AGTGTCCACC 1.9 0.0019 E12.5 retina CGGGGAGATG (5) 1.9 0.0019 E12.5 retina CTGGAAAAAA (10) 1.9 0.0019 E12.5 retina GTCGGCCGCC (25) 1.9 0.0019 E14.5 retina CGGGAGATGC 51 0.051 E14.5 retina AAGAGAAAGA (17) 14.6 0.0146 E14.5 retina GTCGGCCGCC (25) 3.6 0.0036 E14.5 retina ATCAAAAAAA (16) 1.8 0.0018 E16.5 retina CGGGAGATGC 58 0.058 E16.5 retina ATCAAAAAAA (16) 5.4 0.0054 E16.5 retina CACAGTGACC 5.4 0.0054 E16.5 retina AAGAGAAAGA (17) 1.8 0.0018 E16.5 retina GGCGGGATGA (3) 1.8 0.0018 E18.5 retina CGGGAGATGC 80 0.08 E18.5 retina AAGAGAAAGA (17) 16.4 0.0164 E18.5 retina ATCAAAAAAA (16) 5.5 0.0055 E18.5 retina CGGGAAATGC 5.5 0.0055 E18.5 retina CACAGTGACC 1.8 0.0018 E18.5 retina CGGGGAGATG (5) 1.8 0.0018 E18.5 retina CTGGAAAAAA (10) 1.8 0.0018 P0.5 retina CGGGAGATGC 76.5 0.0765 P0.5 retina ATCAAAAAAA (16) 5.9 0.0059 P0.5 retina GTCGGCCGCC (25) 5.9 0.0059 P0.5 retina GGCGGGATGA (3) 3.9 0.0039 P0.5 retina AGTGTCCACC 2 0.002 P0.5 retina CGGGAAATGC 2 0.002 P0.5 retina CTGGAAAAAA (10) 2 0.002 P2.5 retina CGGGAGATGC 116.1 0.1161 P2.5 retina AAGAGAAAGA (17) 8.8 0.0088 P2.5 retina AGGTTGGCCG (3) 5.3 0.0053 P2.5 retina GTCGGCCGCC (25) 3.5 0.0035 P2.5 retina AACGAGGAAG (3) 1.8 0.0018 P2.5 retina AGTGTCCACC 1.8 0.0018 P2.5 retina ATCAAAAAAA (16) 1.8 0.0018 P2.5 retina CGGGAGATGA 1.8 0.0018 P2.5 retina CGGGGAGATG (5) 1.8 0.0018 P4.5 retina CGGGAGATGC 83.2 0.0832 P4.5 retina AAGAGAAAGA (17) 5.9 0.0059 P4.5 retina AGGTTGGCCG (3) 2 0.002 P4.5 retina ATCAAAAAAA (16) 2 0.002 P4.5 retina CGGGAAAATG (3) 2 0.002 P4.5 retina CGGGAAATGC 2 0.002 P4.5 retina CTGGAAAAAA (10) 2 0.002 P4.5 retina GTCGGCCGCC (25) 2 0.002 P6.5 retina CGGGAGATGC 103.4 0.1034 P6.5 retina AAGAGAAAGA (17) 5 0.005 P6.5 retina ATCAAAAAAA (16) 5 0.005 P6.5 retina CGGGAGAGCT 3.3 0.0033 P6.5 retina AACGAGGAAG (3) 1.7 0.0017 P6.5 retina CACAGTGACC 1.7 0.0017 P6.5 retina CCGGGAGATG 1.7 0.0017 P6.5 retina CGGGAAATGC 1.7 0.0017 P6.5 retina CGGGAGATGA 1.7 0.0017 P10.5 crx- retina CGGGAGATGC 113.3 0.1133 P10.5 crx- retina AAGAGAAAGA (17) 9.3 0.0093 P10.5 crx- retina CACAGTGACC 3.7 0.0037 P10.5 crx- retina CCGGGAGATG 3.7 0.0037 P10.5 crx- retina GTCGGCCGCC (25) 3.7 0.0037 P10.5 crx- retina AGTGTCCACC 1.9 0.0019 P10.5 crx- retina ATCAAAAAAA (16) 1.9 0.0019 P10.5 crx- retina CGGGAAATGC 1.9 0.0019 P10.5 crx- retina CGGGAGATGT 1.9 0.0019 P10.5 crx+ retina CGGGAGATGC 130.7 0.1307 P10.5 crx+ retina AAGAGAAAGA (17) 13.5 0.0135 P10.5 crx+ retina ATCAAAAAAA (16) 13.5 0.0135 P10.5 crx+ retina GTCGGCCGCC (25) 3.8 0.0038 P10.5 crx+ retina AACGAGGAAG (3) 1.9 0.0019 P10.5 crx+ retina AGTGTCCACC 1.9 0.0019 P10.5 crx+ retina CACAGTGACC 1.9 0.0019 P10.5 crx+ retina CGGGGAGATG (5) 1.9 0.0019 Adult retinal CGGGAGATGC 57.4 0.0574 Adult retinal AAGAGAAAGA (17) 5.6 0.0056 Adult retinal ATCAAAAAAA (16) 1.9 0.0019 Adult retinal CGGGAGAGCT 1.9 0.0019 Adult retinal CGGGAGATGA 1.9 0.0019 Adult retinal GTCGGCCGCC (25) 1.9 0.0019 ONL CGGGAGATGC 28.7 0.0287 ONL AAGAGAAAGA (17) 13.4 0.0134 ONL CCGGGAGATG 1.9 0.0019 ONL CGGGAAATGC 1.9 0.0019 ONL CGGGGAGATG (5) 1.9 0.0019 ONL CTGGAAAAAA (10) 1.9 0.0019