Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4114	Slc3a2	solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	19	19 0.0 cM	17254
Gene Ontology	alpha-amylase activity | carbohydrate metabolism | defense response | integral to membrane | plasma membrane | protein binding
Human Homolog	SLC3A2[solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 128 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC AGAAAAAAAA (47) 17.9 0.0179 P8 Cb GC CACTGTCTGT 4.9 0.0049 P8 Cb GC AAAAAAGAAA (12) 3.3 0.0033 P8 Cb GC AAAGATGTGG 1.6 0.0016 P8 Cb GC CAAAAGTTTA (2) 1.6 0.0016 P8 Cb GC TGACTGATGG (2) 1.6 0.0016 P8 Cb GC TTTTCTCTTG (7) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AGAAAAAAAA (47) 53.2 0.0532 Cb medulloblastoma AAAAAAGAAA (12) 6.9 0.0069 Cb medulloblastoma CAAAAGTTTA (2) 6.9 0.0069 Cb medulloblastoma AAGCTGGAAA (4) 4.6 0.0046 Cb medulloblastoma AGAAAAACAA (7) 2.3 0.0023 Cb medulloblastoma AGGCAGGGGT (4) 2.3 0.0023 Cb medulloblastoma CACTGTCTTC 2.3 0.0023 Cb medulloblastoma GGAGGGGAAA (4) 2.3 0.0023 Cb medulloblastoma TGGCATATAT (5) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture AGAAAAAAAA (47) 8 0.008 P8 GC+1d culture AAAAAAGAAA (12) 2.3 0.0023 P8 GC+1d culture CACTGTCTTC 2.3 0.0023 P8 GC+1d culture AGAAAAACAA (7) 1.1 0.0011 P8 GC+1d culture CAAAAGTTTA (2) 1.1 0.0011 P8 GC+1d culture TGACTGATGG (2) 1.1 0.0011 P8 GC+1d culture TGGCATATAT (5) 1.1 0.0011 P8 GC+1d culture TTTTCTCTTG (7) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture AGAAAAAAAA (47) 14.1 0.0141 P8 GC+SHH+1d culture CAAAAGTTTA (2) 3.5 0.0035 P8 GC+SHH+1d culture CACTGTCTTC 3.5 0.0035 P8 GC+SHH+1d culture AAAAAAGAAA (12) 2.3 0.0023 P8 GC+SHH+1d culture AGGCAGGGGT (4) 2.3 0.0023 P8 GC+SHH+1d culture CACTGTCTGT 1.2 0.0012 P8 GC+SHH+1d culture GAAGTCACCG (2) 1.2 0.0012 P8 GC+SHH+1d culture TAACACAGAA 1.2 0.0012 P8 GC+SHH+1d culture TACCACCAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture TGGCATATAT (5) 1.2 0.0012 P8 GC+SHH+1d culture TTTTCTCTTG (7) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CACTGTCTTC 7 0.007 3T3 fibroblasts AGAAAAAAAA (47) 3.5 0.0035 3T3 fibroblasts AGGCAGGGGT (4) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CAAAAGTTTA (2) 19.8 0.0198 E15 cortex AGAAAAAAAA (47) 14.8 0.0148 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AGAAAAAAAA (47) 9.1 0.0091 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus AGAAAAAAAA (47) 32.6 0.0326 Hypothalamus TAACACAGAA 5.4 0.0054 Hypothalamus AAGCTGGAAA (4) 1.8 0.0018 Hypothalamus AGAAAAACAA (7) 1.8 0.0018 Hypothalamus AGGCAGGGGT (4) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina AGAAAAAAAA (47) 20.7 0.0207 E12.5 retina CAAAAGTTTA (2) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina AGAAAAAAAA (47) 20 0.02 E14.5 retina AGGCAGGGGT (4) 1.8 0.0018 E14.5 retina CAAAAGTTTA (2) 1.8 0.0018 E14.5 retina TAACACAGAA 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina AGAAAAAAAA (47) 10.9 0.0109 E16.5 retina AAAGATGTGG 3.6 0.0036 E16.5 retina GAAGTCACCG (2) 3.6 0.0036 E16.5 retina CACTGTCTTC 1.8 0.0018 E16.5 retina TAACACAGAA 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina AGAAAAAAAA (47) 29.1 0.0291 E18.5 retina CAAAAGTTTA (2) 3.6 0.0036 E18.5 retina TAACACAGAA 1.8 0.0018 E18.5 retina TGGCATATAT (5) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina AGAAAAAAAA (47) 13.7 0.0137 P0.5 retina CACTGTCTTC 5.9 0.0059 P0.5 retina CTGCATTGTT (6) 2 0.002 P0.5 retina TACCACCAAA (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina AGAAAAAAAA (47) 17.6 0.0176 P2.5 retina AAAAAAGAAA (12) 3.5 0.0035 P2.5 retina TAACACAGAA 1.8 0.0018 P2.5 retina TACCACCAAA (2) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina AGAAAAAAAA (47) 31.7 0.0317 P4.5 retina CAAAAGTTTA (2) 5.9 0.0059 P4.5 retina AAAAAAGAAA (12) 2 0.002 P4.5 retina AGGCAGGGGT (4) 2 0.002 P4.5 retina TAACACAGAA 2 0.002 P4.5 retina TGACTGATGG (2) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina AGAAAAAAAA (47) 13.3 0.0133 P6.5 retina CAAAAGTTTA (2) 5 0.005 P6.5 retina TAACACAGAA 5 0.005 P6.5 retina AAAAAAGAAA (12) 1.7 0.0017 P6.5 retina AAAGATGTGG 1.7 0.0017 P6.5 retina AGGCAGGGGT (4) 1.7 0.0017 P6.5 retina CACTGTCTGT 1.7 0.0017 P6.5 retina CACTGTCTTC 1.7 0.0017 P6.5 retina GAAGTCACCG (2) 1.7 0.0017 P6.5 retina TGACTGATGG (2) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina AAGCTGGAAA (4) 20.4 0.0204 P10.5 crx- retina AGAAAAAAAA (47) 7.4 0.0074 P10.5 crx- retina CAAAAGTTTA (2) 5.6 0.0056 P10.5 crx- retina CTGCATTGTT (6) 3.7 0.0037 P10.5 crx- retina AAAAAAGAAA (12) 1.9 0.0019 P10.5 crx- retina AAAGATGTGG 1.9 0.0019 P10.5 crx- retina CACTGTCTGT 1.9 0.0019 P10.5 crx- retina TAACACAGAA 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina AGAAAAAAAA (47) 5.8 0.0058 P10.5 crx+ retina TAACACAGAA 3.8 0.0038 P10.5 crx+ retina AAGCTGGAAA (4) 1.9 0.0019 P10.5 crx+ retina CTGCATTGTT (6) 1.9 0.0019 P10.5 crx+ retina GAAGTCACCG (2) 1.9 0.0019 P10.5 crx+ retina GGAGGGGAAA (4) 1.9 0.0019 P10.5 crx+ retina TACCACCAAA (2) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal AGAAAAAAAA (47) 5.6 0.0056 Adult retinal CACTGTCTGT 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL AGAAAAAAAA (47) 19.2 0.0192 ONL AAAAAAGAAA (12) 3.8 0.0038 ONL AAAGATGTGG 1.9 0.0019 ONL CAAAAGTTTA (2) 1.9 0.0019 ONL TAACACAGAA 1.9 0.0019 ONL TGACTGATGG (2) 1.9 0.0019