Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.41291
4632417K02
hypothetical protein 4632417K02
9
208117
Mm.41291
2310057K14Rik
RIKEN cDNA 2310057K14 gene
9
69695
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 43 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGCCACCACG (
9
)
8.2
0.0082
P8 Cb GC
TAAAAATGTT (
10
)
1.6
0.0016
Cb medulloblastoma
TGCCACCACG (
9
)
9.2
0.0092
P8 GC+1d culture
CAGCAGCCTC
(
7
)
3.4
0.0034
P8 GC+1d culture
TGCCACCACG (
9
)
3.4
0.0034
P8 GC+1d culture
TAAAAATGTT (
10
)
2.3
0.0023
P8 GC+SHH+1d culture
GTAAGTCTTG
(
2
)
11.7
0.0117
P8 GC+SHH+1d culture
TGCCACCACG (
9
)
8.2
0.0082
P8 GC+SHH+1d culture
TAAAAATGTT (
10
)
2.3
0.0023
3T3 fibroblasts
TGCCACCACG (
9
)
14
0.014
E15 cortex
TGCCACCACG (
9
)
14.8
0.0148
E15 cortex
CAGCAGCCTC
(
7
)
4.9
0.0049
E15 cortex
GTAAGTCTTG
(
2
)
4.9
0.0049
Hypothalamus
TGCCACCACG (
9
)
3.6
0.0036
Hypothalamus
CAGCAGCCTC
(
7
)
1.8
0.0018
E12.5 retina
TGCCACCACG (
9
)
3.8
0.0038
E12.5 retina
GTAAGTCTTG
(
2
)
1.9
0.0019
E12.5 retina
TAAAAATGTT (
10
)
1.9
0.0019
E14.5 retina
CAGCAGCCTC
(
7
)
1.8
0.0018
E14.5 retina
TGCCACCACG (
9
)
1.8
0.0018
E16.5 retina
TGCCACCACG (
9
)
9.1
0.0091
E16.5 retina
GTAAGTCTTG
(
2
)
3.6
0.0036
E18.5 retina
TAAAAATGTT (
10
)
5.5
0.0055
E18.5 retina
TGCCACCACG (
9
)
5.5
0.0055
E18.5 retina
GTAAGTCTTG
(
2
)
3.6
0.0036
E18.5 retina
CAGCAGCCTC
(
7
)
1.8
0.0018
P0.5 retina
GTAAGTCTTG
(
2
)
2
0.002
P0.5 retina
TGCCACCACG (
9
)
2
0.002
P2.5 retina
TGCCACCACG (
9
)
8.8
0.0088
P4.5 retina
TGCCACCACG (
9
)
4
0.004
P6.5 retina
TGCCACCACG (
9
)
5
0.005
P6.5 retina
CAGCAGCCTC
(
7
)
1.7
0.0017
P6.5 retina
GTAAGTCTTG
(
2
)
1.7
0.0017
P6.5 retina
TAAAAATGTT (
10
)
1.7
0.0017
P10.5 crx- retina
TAAAAATGTT (
10
)
1.9
0.0019
P10.5 crx- retina
TGCCACCACG (
9
)
1.9
0.0019
P10.5 crx+ retina
TGCCACCACG (
9
)
5.8
0.0058
P10.5 crx+ retina
GTAAGTCTTG
(
2
)
1.9
0.0019
Adult retinal
TGCCACCACG (
9
)
7.4
0.0074
Adult retinal
GTAAGTCTTG
(
2
)
3.7
0.0037
ONL
CAGCAGCCTC
(
7
)
3.8
0.0038
ONL
GTAAGTCTTG
(
2
)
1.9
0.0019
ONL
TGCCACCACG (
9
)
1.9
0.0019
