Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41329	Cspg4	chondroitin sulfate proteoglycan 4	9		121021
Gene Ontology	activation of MAPK | cell proliferation | glia cell migration | molecular_function unknown | plasma membrane | transmembrane receptor protein tyrosine kinase signaling pathway
Human Homolog	CSPG4[chondroitin sulfate proteoglycan 4 (melanoma-associated)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 22 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTACTCTT 1.6 0.0016 P8 Cb GC TCCCTGGCTG (5) 1.6 0.0016 Cb medulloblastoma GGGGGTGGGG (13) 2.3 0.0023 P8 GC+1d culture GGGGGTGGGG (13) 1.1 0.0011 P8 GC+SHH+1d culture GGGGGTGGGG (13) 1.2 0.0012 3T3 fibroblasts GGGGGGTGGG (10) 3.5 0.0035 P1 cortex ATGTACTCTT 4.5 0.0045 P1 cortex GGGGGGTGGG (10) 4.5 0.0045 Hypothalamus GCCTGCCCCA (3) 3.6 0.0036 Hypothalamus GGGGGTGGGG (13) 1.8 0.0018 E12.5 retina GGGGGTGGGG (13) 1.9 0.0019 E14.5 retina GGGGGTGGGG (13) 1.8 0.0018 P4.5 retina GGGGGTGGGG (13) 2 0.002 P4.5 retina TCCCTGGCTG (5) 2 0.002 P6.5 retina ATGTACTCTT 1.7 0.0017 P6.5 retina GGGGGGTGGG (10) 1.7 0.0017 P6.5 retina TCCCTGGCTG (5) 1.7 0.0017 P10.5 crx+ retina ATGTACTCTT 5.8 0.0058 P10.5 crx+ retina GGGGGTGGGG (13) 3.8 0.0038 Adult retinal GCCTGCCCCA (3) 1.9 0.0019 ONL GGGGGGTGGG (10) 1.9 0.0019 ONL TCCCTGGCTG (5) 1.9 0.0019