Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41372	Vps33a	vacuolar protein sorting 33A (yeast)	5	5 64.0 cM	77573
Gene Ontology	membrane | protein transport | protein transporter activity | transport | vesicle-mediated transport
Human Homolog	VPS33A[vacuolar protein sorting 33A (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAGCCTT (6) 4.9 0.0049 P8 Cb GC TCTGGACTTG (4) 1.6 0.0016 P8 Cb GC TGGATCTCCT (2) 1.6 0.0016 Cb medulloblastoma AAGCTGGAAA (4) 4.6 0.0046 Cb medulloblastoma TCTGGACTTG (4) 4.6 0.0046 P8 GC+1d culture TCTGGACTTG (4) 9.1 0.0091 P8 GC+1d culture GAAAAGCCTT (6) 1.1 0.0011 P8 GC+SHH+1d culture TCTGGACTTG (4) 2.3 0.0023 3T3 fibroblasts GAAAAGCCTT (6) 7 0.007 3T3 fibroblasts TCTGGACTTG (4) 3.5 0.0035 3T3 fibroblasts TGGATCTCCT (2) 3.5 0.0035 E15 cortex TCTGGACTTG (4) 4.9 0.0049 P1 cortex GAAAAGCCTT (6) 9.1 0.0091 P1 cortex TCTGGACTTG (4) 4.5 0.0045 Hypothalamus AAGCTGGAAA (4) 1.8 0.0018 Hypothalamus GAAAAGCCTT (6) 1.8 0.0018 Hypothalamus TAGAATCAGG (2) 1.8 0.0018 Hypothalamus TCTGGACTTG (4) 1.8 0.0018 Hypothalamus TGGATCTCCT (2) 1.8 0.0018 E12.5 retina GAAAAGCCTT (6) 1.9 0.0019 E12.5 retina TAGAATCAGG (2) 1.9 0.0019 E14.5 retina GAAAAGCCTT (6) 1.8 0.0018 E14.5 retina TCTGGACTTG (4) 1.8 0.0018 E16.5 retina GAAAAGCCTT (6) 1.8 0.0018 E16.5 retina TCTGGACTTG (4) 1.8 0.0018 E18.5 retina GAAAAGCCTT (6) 1.8 0.0018 P0.5 retina GAAAAGCCTT (6) 2 0.002 P0.5 retina TCTGGACTTG (4) 2 0.002 P2.5 retina GAAAAGCCTT (6) 1.8 0.0018 P2.5 retina TCTGGACTTG (4) 1.8 0.0018 P4.5 retina TCTGGACTTG (4) 2 0.002 P4.5 retina TGGATCTCCT (2) 2 0.002 P6.5 retina TCTGGACTTG (4) 6.7 0.0067 P10.5 crx- retina AAGCTGGAAA (4) 20.4 0.0204 P10.5 crx- retina GAAAAGCCTT (6) 7.4 0.0074 P10.5 crx- retina TCTGGACTTG (4) 3.7 0.0037 P10.5 crx+ retina TCTGGACTTG (4) 7.7 0.0077 P10.5 crx+ retina AAGCTGGAAA (4) 1.9 0.0019 Adult retinal GAAAAGCCTT (6) 1.9 0.0019 Adult retinal TAGAATCAGG (2) 1.9 0.0019 Adult retinal TCTGGACTTG (4) 1.9 0.0019 ONL TCTGGACTTG (4) 3.8 0.0038