Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.41463
0610041B22Rik
RIKEN cDNA 0610041B22 gene
15
106025
Gene Ontology
kinase activity
Human Homolog
Sharpin[shank-interacting protein-like 1 alpha]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGCAGCTTC
(
2
)
3.3
0.0033
P8 Cb GC
CTTTTAATCC (
33
)
3.3
0.0033
P8 Cb GC
ACCTCCAGCC
(
7
)
1.6
0.0016
Cb medulloblastoma
CTGCAGCTTC
(
2
)
4.6
0.0046
Cb medulloblastoma
TCTCATTGAA (
2
)
2.3
0.0023
P8 GC+1d culture
CTGCAGCTTC
(
2
)
4.6
0.0046
P8 GC+1d culture
CTTTTAATCC (
33
)
1.1
0.0011
P8 GC+1d culture
GTGCCTGGTT (
8
)
1.1
0.0011
P8 GC+SHH+1d culture
CTTTTAATCC (
33
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGCCTGGTT (
8
)
1.2
0.0012
3T3 fibroblasts
TGGCTGCAGA
7
0.007
3T3 fibroblasts
CTGCAGCTTC
(
2
)
3.5
0.0035
3T3 fibroblasts
GGAGGCCCTG (
3
)
3.5
0.0035
E15 cortex
ACCTCCAGCC
(
7
)
4.9
0.0049
P1 cortex
CTTTTAATCC (
33
)
4.5
0.0045
Hypothalamus
ACCTCCAGCC
(
7
)
1.8
0.0018
Hypothalamus
CTGCAGCTTC
(
2
)
1.8
0.0018
Hypothalamus
GTGCCTGGTT (
8
)
1.8
0.0018
Hypothalamus
TCTCATTGAA (
2
)
1.8
0.0018
Hypothalamus
TGGCTGCAGA
1.8
0.0018
E12.5 retina
CTGCAGCTTC
(
2
)
1.9
0.0019
E12.5 retina
CTTTTAATCC (
33
)
1.9
0.0019
E14.5 retina
ACCTCCAGCC
(
7
)
1.8
0.0018
E14.5 retina
CTTTTAATCC (
33
)
1.8
0.0018
E16.5 retina
CTTTTAATCC (
33
)
7.2
0.0072
E16.5 retina
CTGCAGCTTC
(
2
)
1.8
0.0018
E16.5 retina
GGAGGCCCTG (
3
)
1.8
0.0018
E18.5 retina
CTGCAGCTTC
(
2
)
1.8
0.0018
P0.5 retina
ACCTCCAGCC
(
7
)
2
0.002
P4.5 retina
CTGCAGCTTC
(
2
)
5.9
0.0059
P4.5 retina
TCTCATTGAA (
2
)
2
0.002
P6.5 retina
ACCTCCAGCC
(
7
)
3.3
0.0033
P10.5 crx- retina
CTGCAGCTTC
(
2
)
3.7
0.0037
P10.5 crx- retina
CTTTTAATCC (
33
)
3.7
0.0037
P10.5 crx+ retina
CTGCAGCTTC
(
2
)
7.7
0.0077
Adult retinal
CTGCAGCTTC
(
2
)
3.7
0.0037
Adult retinal
CTTTTAATCC (
33
)
3.7
0.0037
Adult retinal
ACCTCCAGCC
(
7
)
1.9
0.0019
ONL
CTTTTAATCC (
33
)
5.7
0.0057
ONL
ACCTCCAGCC
(
7
)
3.8
0.0038
ONL
CTGCAGCTTC
(
2
)
3.8
0.0038
ONL
GGAGGCCCTG (
3
)
1.9
0.0019
