Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41656	Ppif	peptidylprolyl isomerase F (cyclophilin F)	14		105675
Gene Ontology	extracellular space | isomerase activity | mitochondrion | peptidyl-prolyl cis-trans isomerase activity | protein folding
Human Homolog	PPIF[peptidylprolyl isomerase F (cyclophilin F)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGTTCTCAA (9) 3.3 0.0033 P8 Cb GC CTTTTTTCAA (3) 3.3 0.0033 P8 Cb GC ACACATCTGA (2) 1.6 0.0016 P8 Cb GC TCTTGATTTC (3) 1.6 0.0016 Cb medulloblastoma GCCTCTGCTG (8) 4.6 0.0046 Cb medulloblastoma GGCACTGTCC (8) 4.6 0.0046 Cb medulloblastoma TCTTGATTTC (3) 2.3 0.0023 P8 GC+1d culture GGCACTGTCC (8) 4.6 0.0046 P8 GC+1d culture CTGTTCTCAA (9) 2.3 0.0023 P8 GC+1d culture GCCTCTGCTG (8) 2.3 0.0023 P8 GC+1d culture ACACATCTGA (2) 1.1 0.0011 P8 GC+1d culture TGTGACCTGA 1.1 0.0011 P8 GC+SHH+1d culture GGCACTGTCC (8) 3.5 0.0035 P8 GC+SHH+1d culture CTGTTCTCAA (9) 2.3 0.0023 P8 GC+SHH+1d culture TGTGACCTGA 2.3 0.0023 3T3 fibroblasts CTGTTCTCAA (9) 3.5 0.0035 E15 cortex GGCACTGTCC (8) 14.8 0.0148 P1 cortex CTGTTCTCAA (9) 4.5 0.0045 P1 cortex GCCTCTGCTG (8) 4.5 0.0045 Hypothalamus AGGTCAGGCA (3) 1.8 0.0018 Hypothalamus GCCTCTGCTG (8) 1.8 0.0018 Hypothalamus TGTGACCTGA 1.8 0.0018 E12.5 retina ACACATCTGA (2) 1.9 0.0019 E12.5 retina CTGTTCTCAA (9) 1.9 0.0019 E12.5 retina GGCACTGTCC (8) 1.9 0.0019 E14.5 retina CTGTTCTCAA (9) 3.6 0.0036 E14.5 retina CTTTTTTCAA (3) 1.8 0.0018 E14.5 retina GGCACTGTCC (8) 1.8 0.0018 E14.5 retina TCTTGATTTC (3) 1.8 0.0018 E16.5 retina CTGTTCTCAA (9) 1.8 0.0018 E18.5 retina CTTTTTTCAA (3) 1.8 0.0018 E18.5 retina GCCTCTGCTG (8) 1.8 0.0018 P0.5 retina GGCACTGTCC (8) 5.9 0.0059 P0.5 retina ACACATCTGA (2) 3.9 0.0039 P0.5 retina AGGTCAGGCA (3) 2 0.002 P0.5 retina CTGTTCTCAA (9) 2 0.002 P0.5 retina CTTTTTTCAA (3) 2 0.002 P2.5 retina GGCACTGTCC (8) 7 0.007 P2.5 retina CTGTTCTCAA (9) 1.8 0.0018 P4.5 retina CTGTTCTCAA (9) 4 0.004 P6.5 retina GGCACTGTCC (8) 13.3 0.0133 P6.5 retina CTTTTTTCAA (3) 3.3 0.0033 P6.5 retina GCCTCTGCTG (8) 1.7 0.0017 P10.5 crx- retina CTGTTCTCAA (9) 11.1 0.0111 P10.5 crx- retina AGGTCAGGCA (3) 3.7 0.0037 P10.5 crx- retina GCCTCTGCTG (8) 1.9 0.0019 P10.5 crx- retina GGCACTGTCC (8) 1.9 0.0019 P10.5 crx+ retina GCCTCTGCTG (8) 1.9 0.0019 P10.5 crx+ retina GGCACTGTCC (8) 1.9 0.0019 Adult retinal GCCTCTGCTG (8) 1.9 0.0019 Adult retinal GGCACTGTCC (8) 1.9 0.0019 ONL TGTGACCTGA 1.9 0.0019